CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2014-09-25	WIP on prediction	Thomas White

2014-09-25	Remove "sphere", "thin" and "gaussian" partiality models, add "scgaussian"	Thomas White

2014-09-25	WIP on gradients for scsphere	Thomas White

2014-09-24	Remove bandwidth, divergence and profile radius from struct beam_params	Thomas White

2014-09-24	WTF is this doing here?	Thomas White

2014-09-24	Remove beam radius and nphotons from struct beam_params	Thomas White

2014-09-24	Set (hardcoded) "beam" parameters	Thomas White

2014-09-24	Formatting	Thomas White

2014-09-24	hdfsee: Take account of beam parameters	Thomas White

2014-09-24	hdfsee: Fix peak parsing	Thomas White

2014-09-24	Avoid a malloc() call	Thomas White

2014-09-24	Fussiness	Thomas White

2014-09-24	Move photon_energy to "geometry" file	Thomas White

2014-09-22	Formatting	Thomas White

2014-09-22	Beam file removal, part I	Thomas White

2014-09-19	Introduce CrystFEL unit cell files	Thomas White

2014-09-18	Tidy up scaling/CCs a bit	Thomas White

2014-09-18	Fixed message from check_hkl.c	Takanori Nakane

2014-09-18	Fixed option name 'min_cc' to 'min-cc'	Takanori Nakane

2014-09-18	Added scripts/plot-cc-and-scale.R to show how to plot	Takanori Nakane
	frame-wise statistics from process_hkl.
2014-09-18	Calculate CC for each frame. Reject bad frames (--min-cc). Output stats ↵	Takanori Nakane
	(--stat=) But these should be in partialator?
2014-09-12	process_hkl: Fix condition for histogramming	Thomas White

2014-09-12	Formatting	Thomas White

2014-09-12	partial_sim: Initialise image.event to NULL	Thomas White

2014-09-11	Fix flag type	Thomas White

2014-09-11	ambigator: Don't read peak lists	Thomas White
	This fixes a segfault, because the peak list cannot be read without the geometry.
2014-09-09	pattern_sim: Fix handling of centric reflections	Thomas White

2014-09-05	More bugfixes for multi-event mode	Valerio Mariani

2014-09-05	Multi-event mode bug fixes	Valerio Mariani

2014-09-05	Multi-event mode	Valerio Mariani

2014-09-05	Moved opening of file inside hdf5_read function for better encapsulation	Valerio Mariani

2014-09-05	Changed code to use the hdf5_write_image instead of the deprecated hd5_write	Valerio Mariani

2014-09-05	Updated author lists	Valerio Mariani

2014-09-05	Bugfixes to refactored hdf5 reading and writing functions	Valerio Mariani

2014-09-05	Refactoring of peaks and reflections I/O	Valerio Mariani

2014-09-05	Refactoring of hdf5 reading and writing functions	Valerio Mariani

2014-09-05	Geometry file is now mandatory for hdfsee	Valerio Mariani

2014-08-25	Report final indexing percentage	Thomas White

2014-08-19	Clean up a couple of warnings	Thomas White

2014-08-18	hdfsee: Disable calibration mode option when appropriate	Thomas White

2014-08-18	hdfsee: Fix height of status bar	Thomas White

2014-08-18	Fussiness	Thomas White

2014-08-13	Fix handling of overlapping reflections	Thomas White

2014-08-13	indexamajig: Add --highres	Thomas White

2014-08-13	hdfsee/render_hkl: Show negative values on colour scale	Thomas White

2014-08-13	hdfsee: Handle non-integers in numbers view	Thomas White
	This is really horrible, but better than just pretending everything is an integer.
2014-08-13	hdfsee: Tweak scrolling behaviour	Thomas White

2014-08-12	Added scrollbar in hdfsee	Takanori Nakane

2014-08-12	Fussiness	Thomas White

2014-08-12	Export to ADSC format.	Takanori Nakane
	This is useful for manual inspection of indexing in iMOSFLM. Since the original pixel doesn't have one-to-one correspondence in the output image, this is not perfectly accurate.