| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2015-04-20 | Tweak rejection | Thomas White | |
| 2015-04-20 | Add a simple rejection criterion to the prediction refinement | Thomas White | |
| 2015-04-20 | New pairing procedure for prediction refinement (and auto-R) | Thomas White | |
| 2015-04-20 | Fix L gradients (and tidy up unnecessary variables) | Thomas White | |
| 2015-04-20 | Should update clen, not coffset | Thomas White | |
| 2015-04-20 | Fix gradients | Thomas White | |
| 2015-04-20 | Increase precision of det_shift and clen_shift | Thomas White | |
| 2015-04-20 | indexamajig: Reset indexing method if all crystals fail integration | Thomas White | |
| 2015-04-20 | indexamajig: Add --no-refine | Thomas White | |
| 2015-04-20 | Disable paired peak output for now | Thomas White | |
| 2015-04-20 | Output paired peaks for testing | Thomas White | |
| 2015-04-20 | Revert to stingy spot selection for prediction refinement | Thomas White | |
| 2015-04-20 | More generous inclusion of reflections for prediction refinement / auto R | Thomas White | |
| 2015-04-20 | Fix comment | Thomas White | |
| 2015-04-20 | Refine detector position in prediction refinement | Thomas White | |
| 2015-04-20 | Add GPARAM_DETX, GPARAM_DETY and GPARAM_CLEN | Thomas White | |
| 2015-04-20 | Fussiness | Thomas White | |
| 2015-04-20 | refine_prediction(): Improve error handling | Thomas White | |
| 2015-04-20 | refine_{radius,prediction}: unite common code (pair_peaks), avoid ↵ | Thomas White | |
| preliminary integration round | |||
| 2015-04-20 | Factorise dr/da part of gradient calculation for PR and prediction | Thomas White | |
| 2015-04-20 | Remove debugging statements | Thomas White | |
| 2015-04-20 | Record profile radius before and after refinement | Thomas White | |
| 2015-04-20 | Throw out crystals which could not be refined | Thomas White | |
| 2015-04-20 | Tweak debug | Thomas White | |
| Can't use STATUS here if STATUS is also used inside residual() - this leads to a nice deadlock. | |||
| 2015-04-20 | Remove debug | Thomas White | |
| 2015-04-20 | Tweak weightings and cutoffs | Thomas White | |
| 2015-04-20 | Split x and y terms in residual | Thomas White | |
| 2015-04-20 | Make panel assignments invariant during prediction- and post-refinement | Thomas White | |
| Reflections appearing and disappearing are problematic when trying to do a least-squares refinement. Therefore, assume that reflections stay on panel and keep them under consideration even if their partialities go to zero (i.e. they drift off Bragg). This should stabilise both refinements, and simplifies quite a lot of code. Collateral "damage": the old "select_intersection()" is now gone. | |||
| 2015-04-20 | WIP on refinement guts | Thomas White | |
| 2015-04-20 | Add gradient test program and fix gradients | Thomas White | |
| 2015-04-20 | Add prediction refinement | Thomas White | |
| 2015-04-20 | pattern_sim: Normalise spectrum to avoid intensity decreasing with number of ↵ | Thomas White | |
| samples | |||
| 2015-04-20 | partial_sim: Initialise stuff | Thomas White | |
| 2015-04-20 | partial_sim: Complain if geometry contains HDF5 references | Thomas White | |
| 2015-04-20 | partial_sim: Update --help and manual | Thomas White | |
| 2015-04-20 | Fix a string overflow vulnerability, and banish extract_f_from_stuff() | Thomas White | |
| 2015-04-20 | cell_explorer: Ensure initialisation of active_indms[] | Thomas White | |
| 2015-04-01 | Formatting | Thomas White | |
| 2015-04-01 | geoptimiser: Unpack panel data into image->dp before attempting to save PNG | Thomas White | |
| Fixed CRYS-92 (segfault on saving error maps) | |||
| 2015-04-01 | cell_explorer: Switch font to Liberation Serif (from "Serif") | Thomas White | |
| This makes the Greek letters come up at SLAC. | |||
| 2015-04-01 | Initialise indexed_by to INDEXING_NONE | Thomas White | |
| Not entirely sure how this was missed for so long. | |||
| 2015-03-20 | hdfsee: Fix a typo | Thomas White | |
| 2015-03-19 | hdf5_read(): Create simple geometry | Thomas White | |
| This allows unpack_panels() to be called, and hence the same data structures to be available in the simple and geometry cases. Some changes were necessary to hdfsee, which previously created the simple geometery itself | |||
| 2015-03-18 | hdfsee: Use per-panel data and recognise bad regions properly | Thomas White | |
| 2015-03-13 | Move solve_svd() to utils | Thomas White | |
| 2015-03-12 | Remove weighting | Thomas White | |
| This reverts the previous commit. Obviously, if the sigma(I) value is negative, stuff goes wrong. Need a better weighting scheme here. | |||
| 2015-03-12 | Restore weighting when determining scale factors | Thomas White | |
| 2015-03-12 | Fix correction for scaling | Thomas White | |
| 2015-03-12 | Tweak rejection criteria | Thomas White | |
| 2015-03-12 | Keep the centre of the B factor distribution at zero | Thomas White | |
 |
index : CrystFEL | |
| Data processing for serial crystallography | Thomas White |
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