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2013-08-01Count filtered eigenvaluesThomas White
2013-08-01Fix Lorentz gradientThomas White
2013-08-01Add test for gradient of Lorentz factor (as well as partiality)Thomas White
2013-08-01Fix previous commitThomas White
2013-07-31Flag crystals as "not refined" if SVD failsThomas White
2013-07-31Refine divergence as wellThomas White
2013-07-31Rescale the normal equations before attempting to solveThomas White
This makes the equations insensitive to the units of the parameters being refined, e.g. divergence is measured in radians whereas cell parameters are measured in m^-1, so their magnitudes are very different.
2013-07-31Use the correct reference list for selectionThomas White
2013-07-31Tweak rejection criteriaThomas White
2013-07-31Count reflections gained and lost during initial partiality calculationThomas White
2013-07-31Count number of "dud" crystals each iteration, not just at the endThomas White
2013-07-31Tweak error pathThomas White
2013-07-31Require scaling convergence to 5%, not 1%Thomas White
2013-07-31Revert refinement step if too many reflections are lostThomas White
2013-07-31partialator: New convergence criterion for scalingThomas White
Instead of stopping iteration when the absolute value of any scaling factor changes by more than a certain (small) amount, calculate the ratios of the scaling factors to their previous values, and stop when no scaling factor changes by more than 1% compared to the mean ratio. This method is robust against "drifting" of the scale factors when the partiality estimates are poor.
2013-07-31hdfsee: Show simple rings even if not using detector geometryThomas White
2013-07-26partialator: Use Lorentz factor in partiality histogramsThomas White
2013-07-25Tweak commentsThomas White
2013-07-25partialator: Account for Lorentz factorThomas White
2013-07-25partialator: Simplify scalingThomas White
2013-07-22compare_hkl: Fix typoThomas White
2013-07-04Tidy up unused variablesThomas White
2013-07-04process_hkl: Fix sigma calculation (again)Thomas White
Bessel's correction isn't needed here. Or, at least it hasn't been used in the past.
2013-06-30compare_hkl: Tidy up and fix CRDanoThomas White
2013-06-29compare_hkl: For 'CRDano', use known mean of zeroThomas White
2013-06-29Added rms correlation ratio to compare_hkl (CRDano)Lorenzo Galli
2013-06-29partialator: Initialise mosaicityThomas White
2013-06-28partial_sim: Initialise crystal mosaicity, num peaks and num saturated peaksThomas White
2013-06-20compare_hkl: Fix quoted number of rejected reflectionsThomas White
2013-06-10indexamajig: Fix default integration methodThomas White
2013-06-06Set default integration method to "rings-nocen"Thomas White
Applying the Principle of Least Surprise before merging to master. Previously, it was rings-cen.
2013-06-02hdfsee: Fix crash when clicking a found peak with numbers window openThomas White
2013-06-01Fix multiple small memory leaksThomas White
2013-06-01Fix memory leak (properly)Thomas White
2013-06-01Fix memory leaksThomas White
2013-06-01hdfsee: Show panel number in numbers windowThomas White
2013-06-01Set mosaicity to zeroThomas White
Later on, we'll make it refined
2013-05-30Fix previous commitThomas White
2013-05-30Update docsThomas White
2013-05-30indexamajig: Get rid of --use-saturated, because it's now the defaultThomas White
2013-05-30process_hkl: Add --min-snrThomas White
2013-05-30indexamajig: Get rid of --min-integration-snrThomas White
This functionality belongs in process_hkl.
2013-05-30Validate peaks using peak search SNR, not integration SNRThomas White
2013-05-30Tidy upThomas White
2013-05-28--use-saturated should be the defaultThomas White
2013-05-27Individual panel arraysThomas White
2013-05-27Initial integration stuffThomas White
2013-05-27hdfsee: Fix display of feature names (indices) when using geometryThomas White
2013-05-15Disable weighting (for now) and update ChangeLogThomas White
2013-05-15Move polarisation_correction() to geometry.cThomas White