Age | Commit message (Collapse) | Author | |
---|---|---|---|
2021-01-07 | GUI: Basic labelling of reflections | Thomas White | |
Lots of improvements still to be made here, such as using the "real" Cairo text API as well as using proper overlines for negative indices. | |||
2021-01-06 | partialator: Reject crystals with obviously too large profile radii | Thomas White | |
The criterion for "too large" is 20% of the 1/d value for the lowest reflection which is not systematically absent according to the centering. A profile radius larger than the 1/d value for a reflection will crash the xsphere partiality model, and some visualisation shows that this is a clearly non-physical situation. The profile radius shouldn't be anywhere near the inter-Bragg spacing for reasonable data. However, feedback shows that this is happening quite often in real data, probably due to bad indexing. | |||
2021-01-05 | Fix comment typo | Thomas White | |
2020-12-11 | Skeleton figure of merit window for GUI | Thomas White | |
2020-12-11 | Fix comments | Thomas White | |
2020-12-11 | result -> indexing_result | Thomas White | |
Because shortly we will have merging_result as well | |||
2020-12-07 | Rearrange tabs for merge options | Thomas White | |
This makes the interface consistent between the indexing options and the merging options. | |||
2020-12-07 | GUI: Save and restore the selected result | Thomas White | |
2020-12-07 | GUI: Select result when loading stream | Thomas White | |
2020-12-04 | GUI: Set number of threads for merging | Thomas White | |
2020-12-04 | CrystFELMergeOpts: Checkbox disable/deactivation logic | Thomas White | |
2020-12-04 | SLURM: Cancel merging jobs properly | Thomas White | |
2020-12-04 | CrystFELMergeOpts: Improve some text entry widths | Thomas White | |
2020-12-04 | GUI: Set wrap mode for "notes" box | Thomas White | |
2020-12-04 | CrystFELMergeOpts: Fix min-res behaviour | Thomas White | |
2020-12-04 | Formatting | Thomas White | |
2020-12-04 | GUI: Set default resolution for merging to INFINITY | Thomas White | |
Its in Angstroms, not nm^-1 | |||
2020-12-03 | SLURM BE: Submit merge job | Thomas White | |
2020-12-02 | Local BE: Run merging | Thomas White | |
2020-12-02 | Send all streams to process_hkl/partialator | Thomas White | |
2020-12-02 | partialator: Work with multiple input streams | Thomas White | |
2020-12-02 | process_hkl: Work with multiple input streams | Thomas White | |
2020-11-30 | Add merging_command_line() | Thomas White | |
2020-11-30 | Pass result to backend for merging | Thomas White | |
2020-11-30 | Local BE: Genericise subprocess functions | Thomas White | |
2020-11-30 | Move get_crystfel_exe and get_crystfel_path_str to crystfel_gui.c | Thomas White | |
2020-11-30 | Avoid crash when image info button is clicked on an empty image view | Thomas White | |
2020-11-20 | Move indexing option tabs to side, and rearrange | Thomas White | |
This seems to give a more compact and logical layout | |||
2020-11-20 | GUI: Add stream output options including metadata to copy | Thomas White | |
2020-10-30 | Bring common GTK routines into separate file | Thomas White | |
2020-10-30 | Invoke the backend to start merging | Thomas White | |
2020-10-30 | Get the option values in preparation for merging | Thomas White | |
2020-10-30 | CrystFELMergeOpts: implement all getters | Thomas White | |
2020-10-29 | Set peaks/refls visible by default | Thomas White | |
2020-10-29 | Implement checkbox -> widget sensitivity dependencies | Thomas White | |
2020-10-29 | Set all options in CrystFELMergeOpts | Thomas White | |
2020-10-29 | Merge backend plumbing | Thomas White | |
2020-10-29 | Tedious option plumbing | Thomas White | |
2020-10-29 | Custom GTK widgets should not show themselves | Thomas White | |
2020-10-28 | Initial implementation of CrystFELSymmetrySelector | Thomas White | |
This should eventually be replaced by something which behaves a bit like a GtkFileChooserButton | |||
2020-10-28 | Add all merging option widgets | Thomas White | |
2020-10-27 | cell_explorer: Continue (but complain) if a stream can't be readtom/dtempl | Thomas White | |
The GUI asks cell_explorer to load all the streams for a processing run, without knowing if the jobs have completed (or even started) yet. Therefore, cell_explorer needs to be a bit more tolerant. | |||
2020-10-27 | partialator: Don't copy detgeom | Thomas White | |
Detector geometry is not used for scaling/post-refinement | |||
2020-10-27 | Add a new StreamFlag for generating the detgeom structure | Thomas White | |
This is a hack, and should be replaced by something which gets the metadata from the stream rather than hitting the read image file every time. | |||
2020-10-26 | Label all uses of cell tolerances | Thomas White | |
I'm sick of fixing this same issue over and over again. New rule: any code handling unit cell tolerances MUST be labelled with details of units. | |||
2020-10-26 | Fix tolerance units in GUI | Thomas White | |
2020-10-23 | new_job -> new_index_job | Thomas White | |
Because we now have new_merge_job as well. | |||
2020-10-22 | CrystFELIndexingOpts: Fix incorrect variable for push-res value | Thomas White | |
2020-10-22 | Skeleton for merging via GUI | Thomas White | |
2020-10-15 | Add TakeTwo to the list of indexers automatically used | Thomas White | |