CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2013-11-23	indexamajig: Add --int-diag	Thomas White

2013-11-23	Add Histogram, and plot integration test results	Thomas White

2013-11-23	Run the test 1,000 times	Thomas White

2013-11-23	Increase peak integration radius	Thomas White

2013-11-23	Make tests/integration_check work	Thomas White

2013-11-23	Break off integrate_rings_once()	Thomas White

2013-09-13	Add tests/pr_pl_gradient_check for testing gradient of total correction factors	Thomas White

2013-09-13	Fix incorrect handling of monoclinic C cells	Thomas White

2013-08-01	Add test for gradient of Lorentz factor (as well as partiality)	Thomas White

2013-07-25	partialator: Account for Lorentz factor	Thomas White

2013-07-24	Iteration over reflection list should include other reflections with same ↵	Thomas White
	asymmetric indices This fixes a >2 year old bug in the reflection list, and a bug in tests/list_check.c which allowed it to go undetected for so long. The main situation where it would have caused problems is when asymmetric_indices() was called on a reflection list containing symmetrically equivalent reflections. The only core CrystFEL program which does this is partialator. compare_hkl uses asymmetric_indices(), but the reflections are already guaranteed to be asymmetric by that point (because check_list_symmetry() has been called).
2013-07-04	tests/partialator_merge_check_*: Remove scaling-report.pdf afterwards	Thomas White

2013-04-30	Add new tests	Thomas White

2013-04-30	Fix partialator_merge_check_1	Thomas White

2013-04-17	Add tests/partialator_merge_check_1	Thomas White

2013-04-17	tests/pr_gradient_check: Fix criterion	Thomas White

2013-04-17	tests/pr_gradient_check: Add --plot	Thomas White

2013-04-17	pr_gradient_check: Add --quiet, tidy up	Thomas White

2013-04-17	pr_gradient_check: Improved checking	Thomas White

2013-04-17	pr_gradient_check: Make sure list index keeps step with reflection list	Thomas White

2013-04-17	Add script to plot gradients	Thomas White

2013-04-17	Group x, y and z gradients together	Thomas White

2013-04-17	Work on post refinement	Thomas White
	Brought across from "tom/pr" Conflicts: src/indexamajig.c src/post-refinement.c tests/pr_gradient_check.c
2013-04-17	pr_gradient_check: Look for correlations, not individual values	Thomas White

2013-04-17	pr_gradient_check: Fix and improve	Thomas White

2013-04-17	Add the possibility to have different partiality models	Thomas White

2013-04-16	Remove "use_saturated" argument to integrate_peak()	Thomas White
	There are no side-effects to setting it either way, and the caller can just set saturated=NULL or ignore the result.
2013-03-05	Update copyright dates	Thomas White

2013-03-05	pr_gradient_check: Final fixes	Thomas White

2013-03-05	tests/pr_gradient_check: Fix memory bugs	Thomas White

2013-02-15	Update merge tests for new stream format	Thomas White

2013-02-06	Stuff	Thomas White

2013-02-05	WIP on updating partialator	Thomas White

2012-10-21	indexamajig: Record number of saturated reflections in stream	Thomas White

2012-10-19	Update .gitignore	Thomas White

2012-10-12	Add missing file	Thomas White

2012-10-11	Add some more tests	Thomas White

2012-10-11	Tie off loose ends	Thomas White
	This whole idea is rubbish. There's no way to communicate the setting information via the H-M spacegroup symbol in this way, except in a few circumstances. See ITA (2005) section 4.3. This simplifies matters a lot. There's no need for any extra parsing, because the "_uaX" system is sufficient, and is the best that can be done without inventing a whole new system for point group symbols.
2012-10-10	Handle weird unique axis variants of all point groups	Thomas White

2012-10-02	Finishing tweaks for uncentering stuff	Thomas White
	Today, I have mostly been having my life made difficult by the PDB's invention of "H centering".
2012-10-02	Finish transformation_check	Thomas White

2012-10-02	Ignore new test	Thomas White

2012-10-02	More work on transformations	Thomas White

2012-10-02	WIP	Thomas White

2012-10-02	WIP on cell transformations	Thomas White

2012-10-02	Add tests/centering_check	Thomas White

2012-10-02	Move unit cell utility stuff to separate module	Thomas White

2012-10-02	Factorise background mask	Thomas White
	This fixes a speed regression introduced by dca1938a.
2012-08-08	Fix buglets spotted by new compiler on Fedora 17	Thomas White

2012-07-31	pr_gradient_check shouldn't fail the tests	Thomas White
	... because it tests something that's experimental anyway, and the test is rubbish.