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CrystFEL stream format
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num_peaks: The number of peaks accepted for indexing. If you used
"--use-saturated", this includes the saturated peaks which are also counted by
num_saturated_peaks. If you didn't, then it doesn't.
num_saturated_peaks: The number of saturated peaks, regardless of whether or not
they were used for indexing (see --use-saturated).
num_saturated_reflections: The number of saturated reflections, regardless of
whether or not they were included in the reflection list
(see --integrate-saturated). Reflections which could not be integrated for
some other reason, e.g. because they were close to a panel edge or hit a bad
region, are NOT included in this count.
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