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/*
* peaks.h
*
* Peak search and other image analysis
*
* (c) 2006-2010 Thomas White <taw@physics.org>
*
* Part of CrystFEL - crystallography with a FEL
*
*/
#ifndef PEAKS_H
#define PEAKS_H
#ifdef HAVE_CONFIG_H
#include <config.h>
#endif
#include <pthread.h>
#include "reflist.h"
extern void search_peaks(struct image *image, float threshold,
float min_gradient, float min_snr);
extern void integrate_reflections(struct image *image,
int polar, int use_closer, int bgsub,
double min_snr);
extern double peak_lattice_agreement(struct image *image, UnitCell *cell,
double *pst);
extern int peak_sanity_check(struct image *image);
/* Exported so it can be poked by integration_check */
extern int integrate_peak(struct image *image, int cfs, int css,
double *pfs, double *pss, double *intensity,
double *pbg, double *pmax, double *sigma,
int do_polar, int centroid, int bgsub);
extern void estimate_resolution(RefList *list, UnitCell *cell,
double *min, double *max);
#endif /* PEAKS_H */
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