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/*
* peaks.h
*
* Peak search and other image analysis
*
* (c) 2006-2010 Thomas White <taw@physics.org>
*
* Part of CrystFEL - crystallography with a FEL
*
*/
#ifndef PEAKS_H
#define PEAKS_H
#ifdef HAVE_CONFIG_H
#include <config.h>
#endif
#include <pthread.h>
#include "reflist.h"
extern void search_peaks(struct image *image, float threshold,
float min_gradient);
extern void dump_peaks(struct image *image, FILE *ofh, pthread_mutex_t *mutex);
extern void output_intensities(struct image *image, UnitCell *cell,
RefList *reflections,
pthread_mutex_t *mutex, int polar,
int use_closer, FILE *ofh);
extern void output_pixels(struct image *image, UnitCell *cell,
pthread_mutex_t *mutex, int do_polar,
FILE *ofh, int circular_domain, double domain_r);
extern int peak_sanity_check(struct image *image, UnitCell *cell,
int circular_domain, double domain_r);
extern RefList *find_projected_peaks(struct image *image, UnitCell *cell,
int circular_domain, double domain_r);
extern int integrate_peak(struct image *image, int xp, int yp,
float *xc, float *yc, float *intensity,
double *pbg, double *pmax,
int do_polar, int centroid);
#endif /* PEAKS_H */
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