1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
|
# CrystFEL unit tests
# Test wrapper scripts for process_hkl
process_hkl_tests = ['process_hkl_check_1',
'process_hkl_check_2',
'process_hkl_check_3',
'process_hkl_check_4']
foreach name : process_hkl_tests
exe = find_program(name)
test(name, exe, args : [process_hkl.full_path()])
endforeach
# Test wrapper scripts for partialator
partialator_tests = ['partialator_merge_check_1',
'partialator_merge_check_2',
'partialator_merge_check_3']
foreach name : partialator_tests
exe = find_program(name)
test(name, exe, args : [partialator.full_path()])
endforeach
# Test of waiting for files
if hdf5dep.found()
test('file-wait',
find_program('file-wait'),
args : [indexamajig.full_path(),
files('wavelength_geom.h5'),
files('wavelength_geom1.geom')])
endif
test('indexamajig-missing-file',
find_program('indexamajig-missing-file'),
args : [indexamajig.full_path(),
files('wavelength_geom1.geom')])
# Easy unit tests of libcrystfel functions
simple_tests = ['ambi_check',
'cell_check',
'centering_check',
'list_check',
'ring_check',
'symmetry_check',
'transformation_check',
'rational_check',
'spectrum_check',
'cellcompare_check',
'evparse1',
'evparse2',
'evparse3',
'evparse4',
'evparse5',
'evparse6',
'evparse7',
'symop_parse']
foreach name : simple_tests
exe = executable(name, ''.join([name, '.c']),
dependencies : [libcrystfeldep, mdep, gsldep, hdf5dep],
include_directories: conf_inc)
test(name, exe, timeout : 60)
endforeach
# Less easy unit tests for libcrystfel functions
exe = executable('stream_roundtrip',
['stream_roundtrip.c'],
dependencies : [libcrystfeldep])
test('stream_roundtrip', exe,
args: [files('stream_roundtrip.geom')])
exe = executable('stream_read',
['stream_read.c'],
dependencies : [libcrystfeldep])
test_stream = files('test.stream')
test('stream_read',
exe,
args: [test_stream])
exe = executable('integration_check',
['integration_check.c',
'histogram.c'],
dependencies : [libcrystfeldep, mdep, gsldep])
test('integration_check', exe)
exe = executable('prof2d_check',
['prof2d_check.c',
'histogram.c'],
dependencies : [libcrystfeldep, mdep, gsldep])
test('prof2d_check', exe)
# Refinement gradient checks, part 1: panel translations
panel_gradient_tests = [['gradient_panel_x', 'cnx', 'GPARAM_DET_TX'],
['gradient_panel_y', 'cny', 'GPARAM_DET_TY'],
['gradient_panel_z', 'cnz', 'GPARAM_DET_TZ']]
foreach name : panel_gradient_tests
exe = executable(name[0],
['gradient_check.c',
'gradient_check_utils.c'],
c_args : ['-DTHING_TO_MOVE='+name[1],
'-DTEST_GPARAM='+name[2],
'-DTRANSLATE_PANEL=1'],
dependencies : [libcrystfeldep, mdep, gsldep])
test(name[0], exe)
endforeach
# Refinement gradient checks, part 2: panel rotations
panel_gradient_tests = [['gradient_panel_rx', '-DROTATE_PANEL_X', 'GPARAM_DET_RX'],
['gradient_panel_ry', '-DROTATE_PANEL_Y', 'GPARAM_DET_RY'],
['gradient_panel_rz', '-DROTATE_PANEL_Z', 'GPARAM_DET_RZ']]
foreach name : panel_gradient_tests
exe = executable(name[0],
['gradient_check.c',
'gradient_check_utils.c'],
c_args : [name[1],
'-DTEST_GPARAM='+name[2]],
dependencies : [libcrystfeldep, mdep, gsldep])
test(name[0], exe)
endforeach
# Refinement gradient checks, part 3: diffraction physics
panel_gradient_tests = [['gradient_cell_asx', 'asx', 'GPARAM_ASX'],
['gradient_cell_asy', 'asy', 'GPARAM_ASY'],
['gradient_cell_asz', 'asz', 'GPARAM_ASZ'],
['gradient_cell_bsx', 'bsx', 'GPARAM_BSX'],
['gradient_cell_bsy', 'bsy', 'GPARAM_BSY'],
['gradient_cell_bsz', 'bsz', 'GPARAM_BSZ'],
['gradient_cell_csx', 'csx', 'GPARAM_CSX'],
['gradient_cell_csy', 'csy', 'GPARAM_CSY'],
['gradient_cell_csz', 'csz', 'GPARAM_CSZ']]
foreach name : panel_gradient_tests
exe = executable(name[0],
['gradient_check.c',
'gradient_check_utils.c'],
c_args : ['-DTHING_TO_MOVE='+name[1],
'-DTEST_GPARAM='+name[2],
'-DCHANGE_CELL=1'],
dependencies : [libcrystfeldep, mdep, gsldep])
test(name[0], exe)
endforeach
# Event enumeration tests
if hdf5dep.found()
ev_enum_tests = ['ev_enum1',
'ev_enum2',
'ev_enum3']
foreach name : ev_enum_tests
exe = executable(name, ''.join([name, '.c']),
dependencies : [libcrystfeldep, hdf5dep])
h5 = files(''.join([name, '.h5']))
geom = files(''.join([name, '.geom']))
test(name, exe, args : [h5, geom])
endforeach
endif
# Wavelength tests
if hdf5dep.found()
wavelength_tests = [['wavelength_geom1', '1e-10'],
['wavelength_geom2', '1.3776e-10'],
['wavelength_geom3', '1.3776e-10'],
['wavelength_geom4', '1.9687e-12'],
['wavelength_geom5', '1.9687e-12'],
['wavelength_geom6', '1.3776e-10'],
['wavelength_geom7', '1.3776e-10'],
['wavelength_geom8', '1.9687e-12'],
['wavelength_geom9', '1.3776e-10'],
['wavelength_geom10', '1.3776e-10'],
['wavelength_geom11', '1.125e-10'],
['wavelength_geom12', '1.125e-10']]
exe = executable('wavelength_geom', 'wavelength_geom.c',
dependencies : [libcrystfeldep, hdf5dep])
h5 = files('wavelength_geom.h5')
foreach p : wavelength_tests
geom = files(''.join([p[0], '.geom']))
expected_wl = p[1]
test(p[0], exe, args : [h5, geom, expected_wl])
endforeach
endif
test('geom_roundtrip',
find_program('geom_roundtrip'),
args: [adjust_detector.full_path()])
|