Add new tutorial

1 files changed, 359 insertions, 0 deletions

diff --git a/doc/examples/jf-swissfel-16M.geom b/doc/examples/jf-swissfel-16M.geom
new file mode 100644
index 00000000..150198b1
--- /dev/null
+++ b/doc/examples/jf-swissfel-16M.geom
@@ -0,0 +1,359 @@
+adu_per_photon = 1
+res = 13333.3  
+clen = 95.3 mm
+photon_energy = 4570 eV
+
+dim0 = %
+dim1 = ss
+dim2 = fs
+data = /data/data
+
+mask_file = run47.JF06T32V01.mask.h5
+mask = /mask
+mask_good = 1
+mask_bad = 0
+
+bad_bs_1/min_fs = 890
+bad_bs_1/max_fs = 1029
+bad_bs_1/min_ss = 7710
+bad_bs_1/max_ss = 7770
+bad_bs_1/panel = m15
+
+bad_bs_2/min_fs = 957
+bad_bs_2/max_fs = 1029
+bad_bs_2/min_ss = 6050
+bad_bs_2/max_ss = 6167
+bad_bs_2/panel = m11
+
+bad_bs_3/min_fs = 0
+bad_bs_3/max_fs = 135
+bad_bs_3/min_ss = 6631
+bad_bs_3/max_ss = 6681
+bad_bs_3/panel = m12
+
+bad_bs_4/min_fs = 0
+bad_bs_4/max_fs = 60
+bad_bs_4/min_ss = 8224
+bad_bs_4/max_ss = 8351
+bad_bs_4/panel = m16
+
+m0/min_fs = 0.0
+m0/min_ss = 0.0
+m0/max_fs = 1029.0
+m0/max_ss = 513.0
+m0/fs = 0.0003420x -0.9999310y
+m0/ss = -0.9989760x -0.0000500y
+m0/corner_x = 2147.07110898
+m0/corner_y = 1131.30172146
+ 
+m1/min_fs = 0.0
+m1/min_ss = 514.0
+m1/max_fs = 1029.0
+m1/max_ss = 1027.0
+m1/fs = 0.0002220x -0.9997400y
+m1/ss = -0.9992160x -0.0002170y
+m1/corner_x = 2214.25957894
+m1/corner_y = 92.0139285294
+ 
+m2/min_fs = 0.0
+m2/min_ss = 1028.0
+m2/max_fs = 1029.0
+m2/max_ss = 1541.0
+m2/fs = -0.0020481x -1.0005348y
+m2/ss = -0.9983412x +0.0010576y
+m2/corner_x = 1597.4005022
+m2/corner_y = 2101.70211537
+ 
+m3/min_fs = 0.0
+m3/min_ss = 1542.0
+m3/max_fs = 1029.0
+m3/max_ss = 2055.0
+m3/fs = -0.0005887x -0.9997813y
+m3/ss = -0.9982958x +0.0003974y
+m3/corner_x = 1595.17294252
+m3/corner_y = 1063.05183348
+ 
+m4/min_fs = 0.0
+m4/min_ss = 2056.0
+m4/max_fs = 1029.0
+m4/max_ss = 2569.0
+m4/fs = -0.0001283x -0.9994185y
+m4/ss = -0.9998541x +0.0006393y
+m4/corner_x = 1664.06460835
+m4/corner_y = 25.061321815
+ 
+m5/min_fs = 0.0
+m5/min_ss = 2570.0
+m5/max_fs = 1029.0
+m5/max_ss = 3083.0
+m5/fs = 0.0002421x -1.0004238y
+m5/ss = -1.0008347x +0.0011567y
+m5/corner_x = 1663.73373709
+m5/corner_y = -1013.98246581
+ 
+m6/min_fs = 0.0
+m6/min_ss = 3084.0
+m6/max_fs = 1029.0
+m6/max_ss = 3597.0
+m6/fs = -0.0000468x -0.9997925y
+m6/ss = -0.9987864x -0.0015127y
+m6/corner_x = 1044.60276587
+m6/corner_y = 2103.69726324
+ 
+m7/min_fs = 0.0
+m7/min_ss = 3598.0
+m7/max_fs = 1029.0
+m7/max_ss = 4111.0
+m7/fs = -0.0002248x -1.0000118y
+m7/ss = -0.9998321x +0.0003420y
+m7/corner_x = 1046.63423691
+m7/corner_y = 1064.65610742
+ 
+m8/min_fs = 0.0
+m8/min_ss = 4112.0
+m8/max_fs = 1029.0
+m8/max_ss = 4625.0
+m8/fs = -0.0007860x -0.9999388y
+m8/ss = -0.9994561x +0.0006193y
+m8/corner_x = 1114.33039924
+m8/corner_y = 25.1453069861
+ 
+m9/min_fs = 0.0
+m9/min_ss = 4626.0
+m9/max_fs = 1029.0
+m9/max_ss = 5139.0
+m9/fs = 0.0005826x -0.9999539y
+m9/ss = -0.9999378x +0.0005674y
+m9/corner_x = 1112.40812707
+m9/corner_y = -1014.28507319
+ 
+m10/min_fs = 0.0
+m10/min_ss = 5140.0
+m10/max_fs = 1029.0
+m10/max_ss = 5653.0
+m10/fs = 0.0011524x -0.9983465y
+m10/ss = -1.0001167x -0.0014642y
+m10/corner_x = 495.296332614
+m10/corner_y = 2102.19953678
+ 
+m11/min_fs = 0.0
+m11/min_ss = 5654.0
+m11/max_fs = 1029.0
+m11/max_ss = 6167.0
+m11/fs = 0.0000999x -1.0002213y
+m11/ss = -1.0005192x +0.0000633y
+m11/corner_x = 496.656703965
+m11/corner_y = 1065.27724791
+ 
+m12/min_fs = 0.0
+m12/min_ss = 6168.0
+m12/max_fs = 1029.0
+m12/max_ss = 6681.0
+m12/fs = -0.0000855x -0.9999193y
+m12/ss = -1.0004724x -0.0002647y
+m12/corner_x = 564.171218651
+m12/corner_y = 25.4230052458
+ 
+m13/min_fs = 0.0
+m13/min_ss = 6682.0
+m13/max_fs = 1029.0
+m13/max_ss = 7195.0
+m13/fs = -0.0006560x -0.9998388y
+m13/ss = -1.0003827x +0.0003877y
+m13/corner_x = 563.286933163
+m13/corner_y = -1013.80073624
+ 
+m14/min_fs = 0.0
+m14/min_ss = 7196.0
+m14/max_fs = 1029.0
+m14/max_ss = 7709.0
+m14/fs = -0.0000406x -0.9999492y
+m14/ss = -0.9997145x +0.0002315y
+m14/corner_x = -53.7592830185
+m14/corner_y = 2034.98959172
+ 
+m15/min_fs = 0.0
+m15/min_ss = 7710.0
+m15/max_fs = 1029.0
+m15/max_ss = 8223.0
+m15/fs = 0.0000830x -1.0003003y
+m15/ss = -1.0001746x -0.0002212y
+m15/corner_x = -52.8650708457
+m15/corner_y = 997.730814412
+ 
+m16/min_fs = 0.0
+m16/min_ss = 8224.0
+m16/max_fs = 1029.0
+m16/max_ss = 8737.0
+m16/fs = 0.0002819x -0.9998868y
+m16/ss = -1.0001755x -0.0003436y
+m16/corner_x = 14.4730424249
+m16/corner_y = -41.4096494962
+ 
+m17/min_fs = 0.0
+m17/min_ss = 8738.0
+m17/max_fs = 1029.0
+m17/max_ss = 9251.0
+m17/fs = 0.0000710x -0.9999990y
+m17/ss = -0.9999990x -0.0000710y
+m17/corner_x = 14.7182
+m17/corner_y = -1079.99
+ 
+m18/min_fs = 0.0
+m18/min_ss = 9252.0
+m18/max_fs = 1029.0
+m18/max_ss = 9765.0
+m18/fs = 0.0003985x -0.9994658y
+m18/ss = -0.9993795x +0.0010962y
+m18/corner_x = -603.526474602
+m18/corner_y = 2034.67961646
+ 
+m19/min_fs = 0.0
+m19/min_ss = 9766.0
+m19/max_fs = 1029.0
+m19/max_ss = 10279.0
+m19/fs = 0.0001215x -1.0000508y
+m19/ss = -0.9986848x -0.0002170y
+m19/corner_x = -603.013050601
+m19/corner_y = 997.527083431
+ 
+m20/min_fs = 0.0
+m20/min_ss = 10280.0
+m20/max_fs = 1029.0
+m20/max_ss = 10793.0
+m20/fs = -0.0002129x -0.9997114y
+m20/ss = -0.9991926x +0.0001047y
+m20/corner_x = -534.870840943
+m20/corner_y = -41.5520182954
+ 
+m21/min_fs = 0.0
+m21/min_ss = 10794.0
+m21/max_fs = 1029.0
+m21/max_ss = 11307.0
+m21/fs = -0.0012098x -1.0000400y
+m21/ss = -0.9990117x -0.0004867y
+m21/corner_x = -535.088798024
+m21/corner_y = -1080.39407788
+ 
+m22/min_fs = 0.0
+m22/min_ss = 11308.0
+m22/max_fs = 1029.0
+m22/max_ss = 11821.0
+m22/fs = -0.0013763x -1.0016851y
+m22/ss = -0.9984016x +0.0015958y
+m22/corner_x = -1152.66813908
+m22/corner_y = 2037.30125205
+ 
+m23/min_fs = 0.0
+m23/min_ss = 11822.0
+m23/max_fs = 1029.0
+m23/max_ss = 12335.0
+m23/fs = -0.0006443x -0.9996427y
+m23/ss = -0.9992117x +0.0010783y
+m23/corner_x = -1152.1391591
+m23/corner_y = 996.843546324
+ 
+m24/min_fs = 0.0
+m24/min_ss = 12336.0
+m24/max_fs = 1029.0
+m24/max_ss = 12849.0
+m24/fs = -0.0007565x -0.9992784y
+m24/ss = -0.9994284x +0.0005559y
+m24/corner_x = -1084.97948141
+m24/corner_y = -41.5784301786
+ 
+m25/min_fs = 0.0
+m25/min_ss = 12850.0
+m25/max_fs = 1029.0
+m25/max_ss = 13363.0
+m25/fs = -0.0016985x -0.9999457y
+m25/ss = -0.9999488x +0.0004879y
+m25/corner_x = -1084.78264327
+m25/corner_y = -1079.89291543
+ 
+m26/min_fs = 0.0
+m26/min_ss = 13364.0
+m26/max_fs = 1029.0
+m26/max_ss = 13877.0
+m26/fs = 0.0040020x -0.9968330y
+m26/ss = -1.0013620x -0.0004710y
+m26/corner_x = -1707.347444
+m26/corner_y = 2033.21445
+ 
+m27/min_fs = 0.0
+m27/min_ss = 13878.0
+m27/max_fs = 1029.0
+m27/max_ss = 14391.0
+m27/fs = -0.0000440x -0.9995340y
+m27/ss = -0.9987470x +0.0001860y
+m27/corner_x = -1704.0880367
+m27/corner_y = 997.367420522
+ 
+m28/min_fs = 0.0
+m28/min_ss = 14392.0
+m28/max_fs = 1029.0
+m28/max_ss = 14905.0
+m28/fs = -0.0008300x -0.9996020y
+m28/ss = -0.9992680x +0.0001480y
+m28/corner_x = -1632.5362714
+m28/corner_y = -40.9815422
+ 
+m29/min_fs = 0.0
+m29/min_ss = 14906.0
+m29/max_fs = 1029.0
+m29/max_ss = 15419.0
+m29/fs = 0.0009530x -1.0010560y
+m29/ss = -0.9985140x -0.0014000y
+m29/corner_x = -1638.73032075
+m29/corner_y = -1081.459554
+ 
+m30/min_fs = 0.0
+m30/min_ss = 15420.0
+m30/max_fs = 1029.0
+m30/max_ss = 15933.0
+m30/fs = 0.0000710x -0.9999990y
+m30/ss = -0.9999990x -0.0000710y
+m30/corner_x = -2252.42
+m30/corner_y = 997.518
+ 
+m31/min_fs = 0.0
+m31/min_ss = 15934.0
+m31/max_fs = 1029.0
+m31/max_ss = 16447.0
+m31/fs = 0.0000710x -0.9999990y
+m31/ss = -0.9999990x -0.0000710y
+m31/corner_x = -2183.510001
+m31/corner_y = -41.160929
+ 
+m0/coffset = -0.000085
+m1/coffset = -0.000085
+m2/coffset = -0.000085
+m3/coffset = -0.000085
+m4/coffset = -0.000085
+m5/coffset = -0.000085
+m6/coffset = -0.000085
+m7/coffset = -0.000085
+m8/coffset = -0.000085
+m9/coffset = -0.000085
+m10/coffset = -0.000085
+m11/coffset = -0.000085
+m12/coffset = -0.000085
+m13/coffset = -0.000085
+m14/coffset = -0.000085
+m15/coffset = -0.000085
+m16/coffset = -0.000085
+m17/coffset = -0.000085
+m18/coffset = -0.000085
+m19/coffset = -0.000085
+m20/coffset = -0.000085
+m21/coffset = -0.000085
+m22/coffset = -0.000085
+m23/coffset = -0.000085
+m24/coffset = -0.000085
+m25/coffset = -0.000085
+m26/coffset = -0.000085
+m27/coffset = -0.000085
+m28/coffset = -0.000085
+m29/coffset = -0.000085
+m30/coffset = -0.000085
+m31/coffset = -0.000085