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authorThomas White <taw@physics.org>2020-02-05 17:02:47 +0100
committerThomas White <taw@physics.org>2020-02-05 17:03:07 +0100
commited043024bd5d57d676ae2c036eb72badacb5f222 (patch)
tree28a79c7222020adb45c294f90c061605eddb64ab /doc/man/geoptimiser.1
parent6c265f4ab4635c378b1a2ee3a654899470124d4d (diff)
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@@ -27,10 +27,7 @@ For a complete description of the optimization algorithm, see the following pape
O. Yefanov, V. Mariani, C. Gati, T. A. White, H. N. Chapman, and A. Barty. "Accurate determination of segmented X-ray detector geometry". Optics Express 23 (2015) 28459. doi:10.1364/OE.23.028459.
.PP
-For minimal basic use, you need to provide a stream file with diffraction patterns, a geometry file to optimize, a filename for the output optimized geometry, and the name of two rigid group collections defined in the geometry file: one describing which panels in the detector are physically connected (and hence whose geometry should be optimized as if they were a single panel), and one to describe which panels are attached to the same underlying support (whose position and orientation are likely to be correlated).
-
-.PP
-If you leave out the \fB-g\fR option, the geometry file from the stream's audit information will be used. This is usually what you want.
+For minimal basic use, you need to provide a stream file with diffraction patterns, a filename for the output optimized geometry, and the name of two rigid group collections defined in the geometry file: one describing which panels in the detector are physically connected (and hence whose geometry should be optimized as if they were a single panel), and one to describe which panels are attached to the same underlying support (whose position and orientation are likely to be correlated).
.PP
See \fBman crystfel_geometry\fR for information on how to create a file describing the detector geometry, and guidelines to define the required rigid groups and rigid groups collections.