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| author | Thomas White <taw@physics.org> | 2024-01-18 17:55:45 +0100 |
|---|---|---|
| committer | Thomas White <taw@physics.org> | 2024-02-06 16:59:35 +0100 |
| commit | 1b4fdfa5cc1ab4fe9a1cdcbb0bf1602834eaec13 (patch) | |
| tree | 03061175385337244c7605c5810db1d6affcd779 /julia/make-indexed.jl | |
| parent | ff89f33377133352838f27057525701e71c9df7c (diff) | |
Julia: MM semantics for Image.crystals
Diffstat (limited to 'julia/make-indexed.jl')
| -rw-r--r-- | julia/make-indexed.jl | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/julia/make-indexed.jl b/julia/make-indexed.jl new file mode 100644 index 00000000..7a24f606 --- /dev/null +++ b/julia/make-indexed.jl @@ -0,0 +1,26 @@ +using CrystFEL +using Random + +# "Simulate" a diffraction pattern from the reflections +function sketch_pattern(image, cr) + reflist = predictreflections(cr, image) + peaklist = PeakList() + for refl in reflist + if randn() > 0 + let dpos = refl.detectorposition + push!(peaklist, dpos.fs, dpos.ss, dpos.panelnumber, 100.0) + end + end + end + return peaklist +end + + +dtempl = loaddatatemplate("julia/alignment-test.geom") +cell = UnitCell(MonoclinicLattice, PrimitiveCell, 123, 45, 80, 90, 97, 90) +indexer = Indexer("asdf", dtempl, cell, retry=false, multilattice=false, refine=true) + +image = Image(dtempl) +cr = Crystal(rotatecell(cell)) +image.peaklist = sketch_pattern(image, cr) +index(image, indexer) |