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authorKenneth R. Beyerlein <ken.beyerlein@gmail.com>2018-01-31 23:29:01 +0100
committerThomas White <taw@physics.org>2018-02-08 16:32:08 +0100
commitb6cdcc6cc47ee81ae63cdb33bc48ce320a90b36f (patch)
tree19bae9f093f6568d0aac70f349adf66d80fbe181 /libcrystfel
parent5384762850fafbe07900baf81c39928e7a8f253a (diff)
Changed the naming of felix options and variables to make them more obvious.
Diffstat (limited to 'libcrystfel')
-rw-r--r--libcrystfel/src/felix.c20
-rw-r--r--libcrystfel/src/felix.h4
2 files changed, 12 insertions, 12 deletions
diff --git a/libcrystfel/src/felix.c b/libcrystfel/src/felix.c
index e226b037..98b2c7b4 100644
--- a/libcrystfel/src/felix.c
+++ b/libcrystfel/src/felix.c
@@ -77,11 +77,11 @@ struct felix_private
float domega;
float omegarange_min;
float omegarange_max;
- int min_measurements; /* related to "cuts" */
+ int min_visits; /* related to "cuts" */
float min_completeness; /* related to "cuts" */
float max_uniqueness; /* related to "cuts" */
int n_voxels; /* related to "frustsumsize" */
- float test_fraction; /* related to "frustsumsize" */
+ float fraction_max_visits; /* related to "frustsumsize" */
float sigma_tth; /* related to "uncertainties" */
float sigma_eta; /* related to "uncertainties" */
float sigma_omega; /* related to "uncertainties" */
@@ -389,10 +389,10 @@ static char *write_ini(struct image *image, struct felix_private *gp)
fprintf(fh, "domega %f\n", gp->domega);
fprintf(fh, "omegarange %f %f\n", gp->omegarange_min, gp->omegarange_max);
fprintf(fh, "filespecs %s %s\n", gveFilename, logFilename);
- fprintf(fh, "cuts %i %f %f\n", gp->min_measurements, gp->min_completeness,
+ fprintf(fh, "cuts %i %f %f\n", gp->min_visits, gp->min_completeness,
gp->max_uniqueness);
fprintf(fh, "frustumsize %i %f\n", gp->n_voxels,
- gp->test_fraction);
+ gp->fraction_max_visits);
fprintf(fh, "uncertainties %f %f %f\n", gp->sigma_tth,
gp->sigma_eta, gp->sigma_omega);
fprintf(fh, "nsigmas %i\n", gp->n_sigmas);
@@ -644,10 +644,10 @@ void *felix_prepare(IndexingMethod *indm, UnitCell *cell,
gp->domega = 2;
gp->omegarange_min = -1.0;
gp->omegarange_max = 1.0;
- gp->min_measurements = 15;
+ gp->min_visits = 15;
gp->min_completeness = 0.001;
gp->max_uniqueness = 0.5;
- gp->test_fraction = 0.75;
+ gp->fraction_max_visits = 0.75;
gp->sigma_tth = 0.2;
gp->sigma_eta = 0.2;
gp->sigma_omega = 0.2;
@@ -667,8 +667,8 @@ void *felix_prepare(IndexingMethod *indm, UnitCell *cell,
if ( opts->ttmax > 0.0 ) {
gp->tthrange_max = opts->ttmax;
}
- if ( opts->min_measurements > 0 ) {
- gp->min_measurements = opts->min_measurements;
+ if ( opts->min_visits > 0 ) {
+ gp->min_visits = opts->min_visits;
}
if ( opts->min_completeness > 0.0 ) {
gp->min_completeness = opts->min_completeness;
@@ -679,8 +679,8 @@ void *felix_prepare(IndexingMethod *indm, UnitCell *cell,
if ( opts->n_voxels > 0 ) {
gp->n_voxels = opts->n_voxels;
}
- if ( opts->test_fraction > 0.0 ) {
- gp->test_fraction = opts->test_fraction;
+ if ( opts->fraction_max_visits > 0.0 ) {
+ gp->fraction_max_visits = opts->fraction_max_visits;
}
if ( opts->sigma > 0.0 ) {
gp->sigma_tth = opts->sigma;
diff --git a/libcrystfel/src/felix.h b/libcrystfel/src/felix.h
index 6cd78fdb..b1776293 100644
--- a/libcrystfel/src/felix.h
+++ b/libcrystfel/src/felix.h
@@ -40,11 +40,11 @@ struct felix_options
{
double ttmin; /* radians */
double ttmax; /* radians */
- int min_measurements;
+ int min_visits;
double min_completeness;
double max_uniqueness;
int n_voxels;
- double test_fraction;
+ double fraction_max_visits;
double sigma;
double domega;
double max_internal_angle;