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authorThomas White <taw@physics.org>2018-12-03 14:55:32 +0100
committerThomas White <taw@physics.org>2018-12-03 18:26:28 +0100
commitbe36a64d562127c56e66b2c19f028f25472129d5 (patch)
treed6c20f03d5743ba5e64cd76109e647f7f632928c /src/process_image.c
parent4859c44d35f7c71f39237b716090eb086c134795 (diff)
indexamajig: Add --wait-for-file
Diffstat (limited to 'src/process_image.c')
-rw-r--r--src/process_image.c88
1 files changed, 75 insertions, 13 deletions
diff --git a/src/process_image.c b/src/process_image.c
index 2fbf0e4a..31abcb21 100644
--- a/src/process_image.c
+++ b/src/process_image.c
@@ -37,6 +37,7 @@
#include <gsl/gsl_statistics_double.h>
#include <gsl/gsl_sort.h>
#include <unistd.h>
+#include <sys/stat.h>
#include "utils.h"
#include "hdf5-file.h"
@@ -102,7 +103,6 @@ void process_image(const struct index_args *iargs, struct pattern_args *pargs,
int serial, struct sb_shm *sb_shared, TimeAccounts *taccs,
char *last_task)
{
- int check;
struct imagefile *imfile;
struct image image;
int i;
@@ -111,6 +111,9 @@ void process_image(const struct index_args *iargs, struct pattern_args *pargs,
char *rn;
float **prefilter;
int any_crystals;
+ int wait_message_done = 0;
+ int read_retry_done = 0;
+ signed int file_wait_time = iargs->wait_for_file;
image.features = NULL;
image.copyme = iargs->copyme;
@@ -124,22 +127,81 @@ void process_image(const struct index_args *iargs, struct pattern_args *pargs,
image.serial = serial;
image.indexed_by = INDEXING_NONE;
+ time_accounts_set(taccs, TACC_WAITFILE);
+ set_last_task(last_task, "wait for file");
+
+ do {
+
+ struct stat statbuf;
+
+ sb_shared->pings[cookie]++;
+ r = stat(image.filename, &statbuf);
+ if ( r ) {
+
+ if ( (iargs->wait_for_file != 0)
+ && (file_wait_time != 0) )
+ {
+
+ if ( !wait_message_done ) {
+ STATUS("Waiting for '%s'\n",
+ image.filename);
+ wait_message_done = 1;
+ }
+
+ sleep(1);
+ if ( iargs->wait_for_file != -1 ) {
+ file_wait_time--;
+ }
+ continue;
+
+ }
+
+ ERROR("File %s not found\n", image.filename);
+ return;
+ }
+
+ } while ( r );
+
time_accounts_set(taccs, TACC_HDF5OPEN);
set_last_task(last_task, "open file");
sb_shared->pings[cookie]++;
- imfile = imagefile_open(image.filename);
- if ( imfile == NULL ) {
- ERROR("Couldn't open file: %s\n", image.filename);
- return;
- }
- time_accounts_set(taccs, TACC_HDF5READ);
- set_last_task(last_task, "read file");
- sb_shared->pings[cookie]++;
- check = imagefile_read(imfile, &image, image.event);
- if ( check ) {
- return;
- }
+ do {
+ imfile = imagefile_open(image.filename);
+ if ( imfile == NULL ) {
+ if ( iargs->wait_for_file && !read_retry_done ) {
+ read_retry_done = 1;
+ r = 1;
+ STATUS("File '%s' exists but could not be opened."
+ " Trying again after 10 seconds.\n",
+ image.filename);
+ sleep(10);
+ continue;
+ }
+ ERROR("Couldn't open file: %s\n", image.filename);
+ return;
+ }
+
+ time_accounts_set(taccs, TACC_HDF5READ);
+ set_last_task(last_task, "read file");
+ sb_shared->pings[cookie]++;
+
+ r = imagefile_read(imfile, &image, image.event);
+ if ( r ) {
+ if ( iargs->wait_for_file && !read_retry_done ) {
+ read_retry_done = 1;
+ imagefile_close(imfile);
+ STATUS("File '%s' exists but could not be read."
+ " Trying again after 10 seconds.\n",
+ image.filename);
+ sleep(10);
+ continue;
+ }
+ ERROR("Couldn't open file: %s\n", image.filename);
+ return;
+ }
+
+ } while ( r );
/* Take snapshot of image before applying horrible noise filters */
time_accounts_set(taccs, TACC_FILTER);