diff options
| author | Yaroslav Gevorkov <yaroslav.gevorkov@desy.de> | 2018-05-24 15:03:04 +0200 |
|---|---|---|
| committer | Thomas White <taw@physics.org> | 2018-05-30 16:46:56 +0200 |
| commit | d8f176d1902e6fb90747d4065c7e775b86476d5b (patch) | |
| tree | 523e791542a494d38ea21e6504dab084e0c6a1d5 /src | |
| parent | 8c0fce3cc328c0edceb756821e1f498d4f0041d8 (diff) | |
Changed parameter window-radius -> local-bg-radius
Diffstat (limited to 'src')
| -rw-r--r-- | src/indexamajig.c | 9 | ||||
| -rw-r--r-- | src/process_image.c | 2 | ||||
| -rw-r--r-- | src/process_image.h | 1 |
3 files changed, 2 insertions, 10 deletions
diff --git a/src/indexamajig.c b/src/indexamajig.c index 97024b54..1b1545a9 100644 --- a/src/indexamajig.c +++ b/src/indexamajig.c @@ -105,13 +105,11 @@ static void show_help(const char *s) " --max-pix-count=<n> Maximum number of pixels per peak\n" " (peakfinder8 only) Default: 200\n" " --local-bg-radius=<n> Radius (pixels) for local background estimation\n" -" (peakfinder8 only) Default: 3\n" +" (peakfinder8, peakfinder9 only) Default: 3\n" " --min-res=<n> Minimum resolution for peak search (in pixels)\n" " (peakfinder8 only) Default: 0\n" " --max-res=<n> Maximum resolution for peak search (in pixels)\n" " (peakfinder8 only) Default: 1200\n" -" --window-radius=<n> (peakFinder9 only) defines the radius in which the " -" local background is estimated\n" " --min-snr-biggest-pix=<n> (peakFinder9 only) min snr of the biggest pixel in " " the peak\n" " --min-snr-peak-pix=<n> (peakFinder9 only) min snr of a peak pixel\n" @@ -275,7 +273,6 @@ int main(int argc, char *argv[]) iargs.min_snr_whole_peak = 9.0; iargs.min_sig = 11.0; iargs.min_peak_over_neighbour = -INFINITY; - iargs.window_radius = 3; iargs.check_hdf5_snr = 0; iargs.det = NULL; iargs.peaks = PEAK_ZAEF; @@ -425,7 +422,6 @@ int main(int argc, char *argv[]) {"min-snr-peak-pix" ,1, NULL,348}, {"min-sig" ,1, NULL,349}, {"min-peak-over-neighbour" ,1, NULL,350}, - {"window-radius" ,1, NULL,351}, {0, 0, NULL, 0} }; @@ -769,9 +765,6 @@ int main(int argc, char *argv[]) iargs.min_peak_over_neighbour = strtof(optarg, NULL); break; - case 351: - iargs.window_radius = atoi(optarg); - case 0 : break; diff --git a/src/process_image.c b/src/process_image.c index e8bcd911..c12ec3b5 100644 --- a/src/process_image.c +++ b/src/process_image.c @@ -230,7 +230,7 @@ void process_image(const struct index_args *iargs, struct pattern_args *pargs, iargs->min_snr_whole_peak, iargs->min_sig, iargs->min_peak_over_neighbour, - iargs->window_radius) ) + iargs->local_bg_radius) ) { if ( image.event != NULL ) { ERROR("Failed to find peaks in image %s" diff --git a/src/process_image.h b/src/process_image.h index 924b8ac4..7b050e83 100644 --- a/src/process_image.h +++ b/src/process_image.h @@ -90,7 +90,6 @@ struct index_args float min_snr_whole_peak; float min_sig; float min_peak_over_neighbour; - int window_radius; struct imagefile_field_list *copyme; int integrate_saturated; int use_saturated; |