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authorThomas White <taw@physics.org>2013-04-30 17:48:57 +0200
committerThomas White <taw@physics.org>2013-04-30 18:00:48 +0200
commit08e0c29ee81bc3602e89b5bf61ac75d200e90239 (patch)
tree9cd1c6c43f80b8a9a7ebf1f2c0e720e35781ac72 /tests/partialator_merge_check_2
parentf93b8b6546543274e9178f548ef3cc7710390e64 (diff)
Add new tests
Diffstat (limited to 'tests/partialator_merge_check_2')
-rwxr-xr-xtests/partialator_merge_check_279
1 files changed, 79 insertions, 0 deletions
diff --git a/tests/partialator_merge_check_2 b/tests/partialator_merge_check_2
new file mode 100755
index 00000000..50b0c9bf
--- /dev/null
+++ b/tests/partialator_merge_check_2
@@ -0,0 +1,79 @@
+#!/bin/sh
+
+cat > partialator_merge_check_2.stream << EOF
+CrystFEL stream format 2.1
+Command line: indexamajig -i dummy.lst -o dummy.stream --kraken=prawn
+----- Begin chunk -----
+Image filename: dummy.h5
+photon_energy_eV = 2000.0
+--- Begin crystal
+Cell parameters 27.74398 27.84377 16.90346 nm, 88.53688 91.11774 118.75944 deg
+astar = -0.0283891 +0.0149254 -0.0257273 nm^-1
+bstar = -0.0068281 +0.0403989 -0.0005196 nm^-1
+cstar = +0.0406926 +0.0052233 -0.0426520 nm^-1
+Reflections measured after indexing
+ h k l I phase sigma(I) counts fs/px ss/px
+ 1 0 0 100.00 - 1.00 1 938.0 629.0
+End of reflections
+--- End crystal
+--- Begin crystal
+Cell parameters 27.74398 27.84377 16.90346 nm, 88.53688 91.11774 118.75944 deg
+astar = -0.0283891 +0.0149254 -0.0257273 nm^-1
+bstar = -0.0068281 +0.0403989 -0.0005196 nm^-1
+cstar = +0.0406926 +0.0052233 -0.0426520 nm^-1
+Reflections measured after indexing
+ h k l I phase sigma(I) counts fs/px ss/px
+ 1 0 0 200.00 - 1.00 1 938.0 629.0
+End of reflections
+--- End crystal
+----- End chunk -----
+EOF
+
+# We merge two patterns, without partiality but with scaling, the result should
+# be the mean but with the standard deviation should be zero because the scaling
+# factor can absorb the difference.
+cat > partialator_merge_check_2_ans.hkl << EOF
+ h k l I phase sigma(I) counts fs/px ss/px
+ 1 0 0 150.00 - 0.00 2 0.0 0.0
+End of reflections
+EOF
+
+cat > partialator_merge_check_2.beam << EOF
+beam/fluence = 2.0e15
+beam/radius = 1.5e-6
+beam/photon_energy = 6000.0
+beam/bandwidth = 0.0005
+beam/divergence = 0.001
+profile_radius = 0.005e9
+EOF
+
+cat > partialator_merge_check_2.geom << EOF
+0/min_fs = 0
+0/max_fs = 1023
+0/min_ss = 0
+0/max_ss = 1023
+0/corner_x = -512.00
+0/corner_y = -512.00
+0/fs = x
+0/ss = y
+0/clen = 70.0e-3
+0/res = 13333.3 ; 75 micron pixel size
+0/badrow_direction = y
+0/adu_per_eV = 1.0
+EOF
+
+
+src/partialator -i partialator_merge_check_2.stream \
+ -o partialator_merge_check_2.hkl \
+ -g partialator_merge_check_2.geom \
+ -b partialator_merge_check_2.beam \
+ --model=unity --iterations=0
+
+diff partialator_merge_check_2.hkl partialator_merge_check_2_ans.hkl
+if [ $? -ne 0 ]; then
+ exit 1
+fi
+rm -f partialator_merge_check_2.stream partialator_merge_check_2.hkl \
+ partialator_merge_check_2_ans.hkl partialator_merge_check_2.beam \
+ partialator_merge_check_2.geom
+exit 0