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| author | Thomas White <taw@physics.org> | 2013-04-30 17:48:57 +0200 |
|---|---|---|
| committer | Thomas White <taw@physics.org> | 2013-04-30 18:00:48 +0200 |
| commit | 08e0c29ee81bc3602e89b5bf61ac75d200e90239 (patch) | |
| tree | 9cd1c6c43f80b8a9a7ebf1f2c0e720e35781ac72 /tests/partialator_merge_check_2 | |
| parent | f93b8b6546543274e9178f548ef3cc7710390e64 (diff) | |
Add new tests
Diffstat (limited to 'tests/partialator_merge_check_2')
| -rwxr-xr-x | tests/partialator_merge_check_2 | 79 |
1 files changed, 79 insertions, 0 deletions
diff --git a/tests/partialator_merge_check_2 b/tests/partialator_merge_check_2 new file mode 100755 index 00000000..50b0c9bf --- /dev/null +++ b/tests/partialator_merge_check_2 @@ -0,0 +1,79 @@ +#!/bin/sh + +cat > partialator_merge_check_2.stream << EOF +CrystFEL stream format 2.1 +Command line: indexamajig -i dummy.lst -o dummy.stream --kraken=prawn +----- Begin chunk ----- +Image filename: dummy.h5 +photon_energy_eV = 2000.0 +--- Begin crystal +Cell parameters 27.74398 27.84377 16.90346 nm, 88.53688 91.11774 118.75944 deg +astar = -0.0283891 +0.0149254 -0.0257273 nm^-1 +bstar = -0.0068281 +0.0403989 -0.0005196 nm^-1 +cstar = +0.0406926 +0.0052233 -0.0426520 nm^-1 +Reflections measured after indexing + h k l I phase sigma(I) counts fs/px ss/px + 1 0 0 100.00 - 1.00 1 938.0 629.0 +End of reflections +--- End crystal +--- Begin crystal +Cell parameters 27.74398 27.84377 16.90346 nm, 88.53688 91.11774 118.75944 deg +astar = -0.0283891 +0.0149254 -0.0257273 nm^-1 +bstar = -0.0068281 +0.0403989 -0.0005196 nm^-1 +cstar = +0.0406926 +0.0052233 -0.0426520 nm^-1 +Reflections measured after indexing + h k l I phase sigma(I) counts fs/px ss/px + 1 0 0 200.00 - 1.00 1 938.0 629.0 +End of reflections +--- End crystal +----- End chunk ----- +EOF + +# We merge two patterns, without partiality but with scaling, the result should +# be the mean but with the standard deviation should be zero because the scaling +# factor can absorb the difference. +cat > partialator_merge_check_2_ans.hkl << EOF + h k l I phase sigma(I) counts fs/px ss/px + 1 0 0 150.00 - 0.00 2 0.0 0.0 +End of reflections +EOF + +cat > partialator_merge_check_2.beam << EOF +beam/fluence = 2.0e15 +beam/radius = 1.5e-6 +beam/photon_energy = 6000.0 +beam/bandwidth = 0.0005 +beam/divergence = 0.001 +profile_radius = 0.005e9 +EOF + +cat > partialator_merge_check_2.geom << EOF +0/min_fs = 0 +0/max_fs = 1023 +0/min_ss = 0 +0/max_ss = 1023 +0/corner_x = -512.00 +0/corner_y = -512.00 +0/fs = x +0/ss = y +0/clen = 70.0e-3 +0/res = 13333.3 ; 75 micron pixel size +0/badrow_direction = y +0/adu_per_eV = 1.0 +EOF + + +src/partialator -i partialator_merge_check_2.stream \ + -o partialator_merge_check_2.hkl \ + -g partialator_merge_check_2.geom \ + -b partialator_merge_check_2.beam \ + --model=unity --iterations=0 + +diff partialator_merge_check_2.hkl partialator_merge_check_2_ans.hkl +if [ $? -ne 0 ]; then + exit 1 +fi +rm -f partialator_merge_check_2.stream partialator_merge_check_2.hkl \ + partialator_merge_check_2_ans.hkl partialator_merge_check_2.beam \ + partialator_merge_check_2.geom +exit 0 |