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-rw-r--r--doc/man/indexamajig.112
1 files changed, 7 insertions, 5 deletions
diff --git a/doc/man/indexamajig.1 b/doc/man/indexamajig.1
index 19a2b942..ba659e7c 100644
--- a/doc/man/indexamajig.1
+++ b/doc/man/indexamajig.1
@@ -343,11 +343,13 @@ At the moment, CrystFEL's core symmetry module only knows about one setting for
.SH BUGS
-
Don't run more than one indexamajig jobs simultaneously in the same working
directory - they'll overwrite each other's DirAx or MOSFLM files, causing subtle
problems which can't easily be detected.
-
+.PP
+The way indexamajig calculates the intensities and errors of peaks sucks, for want of a better word. In particular, I/sigma(I) is not accurately estimated and many of the options don't make sense. Development of improved integration algorithms is in progress, so this issue will be addressed in a future version of CrystFEL.
+.PP
+ReAx indexing is experimental. It works very nicely for some people, and crashes for others. In a future version, it will be improved and fully supported.
.SH AUTHOR
This page was written by Thomas White.
@@ -368,6 +370,6 @@ You should have received a copy of the GNU General Public License along with Cry
.SH SEE ALSO
.BR crystfel (7),
-.BR check_hkl (1),
-.BR compare_hkl (1),
-.BR pattern_sim (1)
+.BR crystfel_geometry (5),
+.BR process_hkl (1),
+.BR partialator (1)