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Diffstat (limited to 'julia/plot-geom.jl')
-rw-r--r-- | julia/plot-geom.jl | 162 |
1 files changed, 162 insertions, 0 deletions
diff --git a/julia/plot-geom.jl b/julia/plot-geom.jl new file mode 100644 index 00000000..754111e0 --- /dev/null +++ b/julia/plot-geom.jl @@ -0,0 +1,162 @@ +using CrystFEL +using GLMakie + +function readmillepede(filename) + fh = open(filename, "r") + readline(fh) # discard header line + motions = map(eachline(fh)) do line + sgroupser,sdelta,_ = split(line) + (parse(Int,sgroupser), parse(Float64,sdelta)) + end + return motions +end + +function findeigenvector(fh, num) + while !eof(fh) + l = readline(fh) + bits = split(l) + if length(bits) == 5 + if bits[1] == "Eigenvector" + if parse(Int, bits[2]) == num + return + end + end + end + end + error("Eigenvector not found") +end + +function readeigenvector(filename, num) + fh = open(filename, "r") + findeigenvector(fh, num) + motions = [] + while !eof(fh) + l = readline(fh) + length(l) < 3 && return motions + bits = split(l) + for i in 1:2:length(bits) + push!(motions, (parse(Int,bits[i]), parse(Float64,bits[i+1]))) + end + end + return motions +end + +function translate!(panel::DetGeomPanel, vec) + panel.corner += vec/panel.pixel_pitch +end + +function translate!(group::DetGeomGroup, vec) + for child in group.children + translate!(child, vec) + end +end + +function rotate2d!(p, c, ang) + nx = c[1] + (p[1]-c[1])*cos(ang) - (p[2]-c[2])*sin(ang); + ny = c[2] + (p[1]-c[1])*sin(ang) + (p[2]-c[2])*cos(ang); + p[1] = nx + p[2] = ny +end + +function rotatex!(panel::DetGeomPanel, center, angle) + rotate2d!(view(panel.corner, 2:3), center[2:3]/panel.pixel_pitch, angle); + rotate2d!(view(panel.fsvec, 2:3), [0,0], angle); + rotate2d!(view(panel.ssvec, 2:3), [0,0], angle); +end + +function rotatey!(panel::DetGeomPanel, center, angle) + rotate2d!(view(panel.corner, 3:-2:1), center[3:-2:1]/panel.pixel_pitch, angle); + rotate2d!(view(panel.fsvec, 3:-2:1), [0,0], angle); + rotate2d!(view(panel.ssvec, 3:-2:1), [0,0], angle); +end + +function rotatez!(panel::DetGeomPanel, center, angle) + rotate2d!(view(panel.corner, 1:2), center[1:2]/panel.pixel_pitch, angle); + rotate2d!(view(panel.fsvec, 1:2), [0,0], angle); + rotate2d!(view(panel.ssvec, 1:2), [0,0], angle); +end + +function rotatex!(group::DetGeomGroup, center, angle) + for child in group.children + rotatex!(child, center, angle) + end +end + +function rotatey!(group::DetGeomGroup, center, angle) + for child in group.children + rotatey!(child, center, angle) + end +end + +function rotatez!(group::DetGeomGroup, center, angle) + for child in group.children + rotatez!(child, center, angle) + end +end + +function plotgeom!(dtempl, motions) + + f = Figure(size=(1024,1024)) + ax = Axis3(f[1,1], aspect=:equal, limits=(nothing,nothing,nothing,nothing,0,0.3), + xlabel="x (meters)", ylabel="y (meters)", zlabel="z (meters)") + sl = Slider(f[2,1], range=0:0.01:1) + btoggle = Toggle(f, halign=:left, tellwidth=false) + f[3,1] = grid!([1,1]=>Label(f, "Show beams", halign=:right, tellwidth=false), [1,2]=>btoggle) + + cfimage = CrystFEL.Image(dtempl) + triangles = lift(sl.value) do trscale + + dgmoved = cfimage.detgeom # Makes a fresh copy of underlying C structure + + # Apply all `motions` in the same way as align_detector + for m in motions + param = m[1] % 100 + group = findgroup(dgmoved, m[1]-param) + if param == 1 + translate!(group, trscale*[-m[2],0,0]) + elseif param == 2 + translate!(group, trscale*[0,-m[2],0]) + elseif param == 3 + translate!(group, trscale*[0,0,-m[2]]) + elseif param == 4 + rotatex!(group, group.center, trscale*-m[2]) + elseif param == 5 + rotatey!(group, group.center, trscale*-m[2]) + elseif param == 6 + rotatez!(group, group.center, trscale*-m[2]) + end + end + + # Generate triangle mesh from panel descriptions + points = Point3f[] + for panel in dgmoved.panels + + corner = panel.pixel_pitch*panel.corner + fs = panel.pixel_pitch*panel.w*panel.fsvec + ss = panel.pixel_pitch*panel.h*panel.ssvec + + push!(points, corner) + push!(points, corner+fs) + push!(points, corner+fs+ss) + push!(points, corner+fs+ss) + push!(points, corner+ss) + push!(points, corner) + + end + + return points + + end + + beams = map(cfimage.detgeom.panels) do p + cen = (p.corner+p.fsvec*p.w/2+p.ssvec*p.h/2)*1.5*p.pixel_pitch + ((0,0,0), Tuple(cen)) + end + + mesh!(triangles, color="#7f7f7f") + beamv = lines!(collect(Iterators.flatten(beams[1:4:end])), color="#008080") + connect!(beamv.visible, btoggle.active) + + return f + +end |