diff options
Diffstat (limited to 'libcrystfel/src/index.c')
| -rw-r--r-- | libcrystfel/src/index.c | 29 |
1 files changed, 22 insertions, 7 deletions
diff --git a/libcrystfel/src/index.c b/libcrystfel/src/index.c index 6f046ab6..6b36af3e 100644 --- a/libcrystfel/src/index.c +++ b/libcrystfel/src/index.c @@ -44,6 +44,7 @@ #include "utils.h" #include "peaks.h" #include "dirax.h" +#include "asdf.h" #include "mosflm.h" #include "xds.h" #include "detector.h" @@ -92,12 +93,16 @@ IndexingPrivate **prepare_indexing(IndexingMethod *indm, UnitCell *cell, iprivs[n] = dirax_prepare(&indm[n], cell, det, ltl); break; + case INDEXING_ASDF : + iprivs[n] = asdf_prepare(&indm[n], cell, det, ltl); + break; + case INDEXING_MOSFLM : iprivs[n] = mosflm_prepare(&indm[n], cell, det, ltl); break; case INDEXING_XDS : - iprivs[n] = xds_prepare(&indm[n], cell, det, ltl); + iprivs[n] = xds_prepare(&indm[n], cell, det, ltl); break; case INDEXING_REAX : @@ -167,6 +172,10 @@ void cleanup_indexing(IndexingMethod *indms, IndexingPrivate **privs) dirax_cleanup(privs[n]); break; + case INDEXING_ASDF : + asdf_cleanup(privs[n]); + break; + case INDEXING_MOSFLM : mosflm_cleanup(privs[n]); break; @@ -236,6 +245,10 @@ static int try_indexer(struct image *image, IndexingMethod indm, return run_dirax(image, ipriv); break; + case INDEXING_ASDF : + return run_asdf(image, ipriv); + break; + case INDEXING_MOSFLM : return run_mosflm(image, ipriv); break; @@ -272,11 +285,6 @@ void index_pattern(struct image *image, if ( indms == NULL ) return; - if ( image_feature_count(image->features) > 10000 ) { - STATUS("WARNING: The number of peaks is very large for '%s'.\n", - image->filename); - } - map_all_peaks(image); image->crystals = NULL; image->n_crystals = 0; @@ -373,6 +381,10 @@ char *indexer_str(IndexingMethod indm) strcpy(str, "dirax"); break; + case INDEXING_ASDF : + strcpy(str, "asdf"); + break; + case INDEXING_MOSFLM : strcpy(str, "mosflm"); break; @@ -451,13 +463,16 @@ IndexingMethod *build_indexer_list(const char *str) if ( strcmp(methods[i], "dirax") == 0) { list[++nmeth] = INDEXING_DEFAULTS_DIRAX; + } else if ( strcmp(methods[i], "asdf") == 0) { + list[++nmeth] = INDEXING_DEFAULTS_ASDF; + } else if ( strcmp(methods[i], "mosflm") == 0) { list[++nmeth] = INDEXING_DEFAULTS_MOSFLM; } else if ( strcmp(methods[i], "grainspotter") == 0) { list[++nmeth] = INDEXING_DEFAULTS_GRAINSPOTTER; - } else if ( strcmp(methods[i], "xds") == 0) { + } else if ( strcmp(methods[i], "xds") == 0) { list[++nmeth] = INDEXING_DEFAULTS_XDS; } else if ( strcmp(methods[i], "reax") == 0) { |