diff options
Diffstat (limited to 'libcrystfel/src/peakfinder8.c')
-rw-r--r-- | libcrystfel/src/peakfinder8.c | 417 |
1 files changed, 210 insertions, 207 deletions
diff --git a/libcrystfel/src/peakfinder8.c b/libcrystfel/src/peakfinder8.c index 80a219cb..1def35d3 100644 --- a/libcrystfel/src/peakfinder8.c +++ b/libcrystfel/src/peakfinder8.c @@ -119,26 +119,26 @@ static struct radial_stats_pixels *compute_rstats_pixels(struct radius_maps *rma int i; struct radial_stats_pixels *rsp = NULL; - rsp = (struct radial_stats_pixels *)malloc(sizeof(struct radial_stats_pixels)); + rsp = (struct radial_stats_pixels *)cfmalloc(sizeof(struct radial_stats_pixels)); if ( rsp == NULL ) { return NULL; } - rsp->n_pixels = (int *)malloc(rmaps->n_rmaps * sizeof(int)); + rsp->n_pixels = (int *)cfmalloc(rmaps->n_rmaps * sizeof(int)); if ( rsp->n_pixels == NULL ) { - free(rsp); + cffree(rsp); return NULL; } - rsp->pidx = (int **)malloc(rmaps->n_rmaps * sizeof(int *)); + rsp->pidx = (int **)cfmalloc(rmaps->n_rmaps * sizeof(int *)); if ( rsp->pidx == NULL ) { - free(rsp->n_pixels); - free(rsp); + cffree(rsp->n_pixels); + cffree(rsp); return NULL; } - rsp->radius = (int **)malloc(rmaps->n_rmaps * sizeof(int *)); + rsp->radius = (int **)cfmalloc(rmaps->n_rmaps * sizeof(int *)); if ( rsp->radius == NULL ) { - free(rsp->n_pixels); - free(rsp->pidx); - free(rsp); + cffree(rsp->n_pixels); + cffree(rsp->pidx); + cffree(rsp); return NULL; } srand(0); @@ -147,16 +147,16 @@ static struct radial_stats_pixels *compute_rstats_pixels(struct radius_maps *rma // Assuming 5000 is the maximum possible radius int n_bins = 5000; - int *n_pixels = (int *)malloc(n_bins * sizeof(int)); // selected pixels per bin - int *n_tot_pixels = (int *)malloc(n_bins * sizeof(int));; // total pixels per bin - int **panel = (int **)malloc(n_bins * sizeof(int *)); // panel ID of selected pixels - int **idx = (int **)malloc(n_bins * sizeof(int *)); // index of selected pixels + int *n_pixels = (int *)cfmalloc(n_bins * sizeof(int)); // selected pixels per bin + int *n_tot_pixels = (int *)cfmalloc(n_bins * sizeof(int));; // total pixels per bin + int **panel = (int **)cfmalloc(n_bins * sizeof(int *)); // panel ID of selected pixels + int **idx = (int **)cfmalloc(n_bins * sizeof(int *)); // index of selected pixels for ( i = 0; i < n_bins; i++ ) { n_pixels[i] = 0; n_tot_pixels[i] = 0; - panel[i] = (int *)malloc(n_pixels_per_bin * sizeof(int)); - idx[i] = (int *)malloc(n_pixels_per_bin * sizeof(int)); + panel[i] = (int *)cfmalloc(n_pixels_per_bin * sizeof(int)); + idx[i] = (int *)cfmalloc(n_pixels_per_bin * sizeof(int)); } int radius; @@ -186,40 +186,40 @@ static struct radial_stats_pixels *compute_rstats_pixels(struct radius_maps *rma } } - int *sidx = (int *)malloc(rmaps->n_rmaps * sizeof(int)); + int *sidx = (int *)cfmalloc(rmaps->n_rmaps * sizeof(int)); if ( sidx == NULL ) { - free(rsp->n_pixels); - free(rsp->pidx); - free(rsp->radius); - free(rsp); + cffree(rsp->n_pixels); + cffree(rsp->pidx); + cffree(rsp->radius); + cffree(rsp); return NULL; } for ( p = 0; p < rmaps->n_rmaps; p++ ) { - rsp->pidx[p] = (int *)malloc(rsp->n_pixels[p] * sizeof(int)); + rsp->pidx[p] = (int *)cfmalloc(rsp->n_pixels[p] * sizeof(int)); if ( rsp->pidx[p] == NULL ) { for ( i = 0; i < p; i++ ) { - free(rsp->pidx[i]); - free(rsp->radius[i]); + cffree(rsp->pidx[i]); + cffree(rsp->radius[i]); } - free(rsp->pidx); - free(rsp->radius); - free(rsp->n_pixels); - free(rsp); - free(sidx); + cffree(rsp->pidx); + cffree(rsp->radius); + cffree(rsp->n_pixels); + cffree(rsp); + cffree(sidx); return NULL; } - rsp->radius[p] = (int *)malloc(rsp->n_pixels[p] * sizeof(int)); + rsp->radius[p] = (int *)cfmalloc(rsp->n_pixels[p] * sizeof(int)); if ( rsp->radius[p] == NULL ) { for ( i = 0; i < p; i++ ) { - free(rsp->pidx[i]); - free(rsp->radius[i]); + cffree(rsp->pidx[i]); + cffree(rsp->radius[i]); } - free(rsp->pidx[p]); - free(rsp->pidx); - free(rsp->radius); - free(rsp->n_pixels); - free(rsp); - free(sidx); + cffree(rsp->pidx[p]); + cffree(rsp->pidx); + cffree(rsp->radius); + cffree(rsp->n_pixels); + cffree(rsp); + cffree(sidx); return NULL; } sidx[p] = 0; @@ -233,15 +233,15 @@ static struct radial_stats_pixels *compute_rstats_pixels(struct radius_maps *rma sidx[p] += 1; } } - free(sidx); + cffree(sidx); for ( i = 0; i < n_bins; i++ ) { - free(panel[i]); - free(idx[i]); + cffree(panel[i]); + cffree(idx[i]); } - free(panel); - free(idx); - free(n_pixels); - free(n_tot_pixels); + cffree(panel); + cffree(idx); + cffree(n_pixels); + cffree(n_tot_pixels); rsp->n_panels = rmaps->n_rmaps; return rsp; @@ -251,13 +251,13 @@ static void free_rstats_pixels(struct radial_stats_pixels *rsp) { int i; for ( i = 0; i < rsp->n_panels; i++ ) { - free(rsp->pidx[i]); - free(rsp->radius[i]); + cffree(rsp->pidx[i]); + cffree(rsp->radius[i]); } - free(rsp->pidx); - free(rsp->radius); - free(rsp->n_pixels); - free(rsp); + cffree(rsp->pidx); + cffree(rsp->radius); + cffree(rsp->n_pixels); + cffree(rsp); } @@ -267,20 +267,20 @@ static struct radius_maps *compute_radius_maps(struct detgeom *det) struct detgeom_panel p; struct radius_maps *rm = NULL; - rm = (struct radius_maps *)malloc(sizeof(struct radius_maps)); + rm = (struct radius_maps *)cfmalloc(sizeof(struct radius_maps)); if ( rm == NULL ) { return NULL; } - rm->r_maps = (float **)malloc(det->n_panels*sizeof(float*)); + rm->r_maps = (float **)cfmalloc(det->n_panels*sizeof(float*)); if ( rm->r_maps == NULL ) { - free(rm); + cffree(rm); return NULL; } - rm->n_pixels = (int *)malloc(det->n_panels*sizeof(int*)); + rm->n_pixels = (int *)cfmalloc(det->n_panels*sizeof(int*)); if ( rm->r_maps == NULL ) { - free(rm); + cffree(rm); return NULL; } @@ -289,13 +289,13 @@ static struct radius_maps *compute_radius_maps(struct detgeom *det) for( i=0 ; i<det->n_panels ; i++ ) { p = det->panels[i]; - rm->r_maps[i] = (float *)malloc(p.h*p.w*sizeof(float)); + rm->r_maps[i] = (float *)cfmalloc(p.h*p.w*sizeof(float)); if ( rm->r_maps[i] == NULL ) { for ( u = 0; u<i; u++ ) { - free(rm->r_maps[u]); + cffree(rm->r_maps[u]); } - free(rm); + cffree(rm); return NULL; } rm->n_pixels[i] = p.h * p.w; @@ -323,11 +323,11 @@ static void free_radius_maps(struct radius_maps *r_maps) int i; for ( i=0 ; i<r_maps->n_rmaps ; i++ ) { - free(r_maps->r_maps[i]); + cffree(r_maps->r_maps[i]); } - free(r_maps->r_maps); - free(r_maps->n_pixels); - free(r_maps); + cffree(r_maps->r_maps); + cffree(r_maps->n_pixels); + cffree(r_maps); } @@ -339,13 +339,13 @@ struct pf8_private_data *prepare_peakfinder8(struct detgeom *det, int fast_mode) return NULL; } - data = (struct pf8_private_data *)malloc(sizeof(struct pf8_private_data)); + data = (struct pf8_private_data *)cfmalloc(sizeof(struct pf8_private_data)); if ( data == NULL ) { return NULL; } data->rmaps = compute_radius_maps(det); if ( data->rmaps == NULL ) { - free(data); + cffree(data); return NULL; } if ( fast_mode ) { @@ -369,11 +369,11 @@ void free_pf8_private_data(struct pf8_private_data *data) if ( data->fast_mode ) { free_rstats_pixels(data->rpixels); } - free(data); + cffree(data); } -static struct peakfinder_mask *create_peakfinder_mask(struct image *img, +static struct peakfinder_mask *create_peakfinder_mask(const struct image *img, struct radius_maps *rmps, int min_res, int max_res) @@ -381,8 +381,8 @@ static struct peakfinder_mask *create_peakfinder_mask(struct image *img, int i; struct peakfinder_mask *msk; - msk = (struct peakfinder_mask *)malloc(sizeof(struct peakfinder_mask)); - msk->masks =(char **) malloc(img->detgeom->n_panels*sizeof(char*)); + msk = (struct peakfinder_mask *)cfmalloc(sizeof(struct peakfinder_mask)); + msk->masks =(char **) cfmalloc(img->detgeom->n_panels*sizeof(char*)); msk->n_masks = img->detgeom->n_panels; for ( i=0; i<img->detgeom->n_panels; i++) { @@ -391,7 +391,7 @@ static struct peakfinder_mask *create_peakfinder_mask(struct image *img, p = img->detgeom->panels[i]; - msk->masks[i] = (char *)calloc(p.w*p.h,sizeof(char)); + msk->masks[i] = (char *)cfcalloc(p.w*p.h,sizeof(char)); for ( iss=0 ; iss<p.h ; iss++ ) { for ( ifs=0 ; ifs<p.w ; ifs++ ) { @@ -422,10 +422,10 @@ static void free_peakfinder_mask(struct peakfinder_mask * pfmask) int i; for ( i=0 ; i<pfmask->n_masks ; i++ ) { - free(pfmask->masks[i]); + cffree(pfmask->masks[i]); } - free(pfmask->masks); - free(pfmask); + cffree(pfmask->masks); + cffree(pfmask); } @@ -434,29 +434,29 @@ static struct peakfinder_panel_data *allocate_panel_data(int num_panels) struct peakfinder_panel_data *pfdata; - pfdata = (struct peakfinder_panel_data *)malloc(sizeof(struct peakfinder_panel_data)); + pfdata = (struct peakfinder_panel_data *)cfmalloc(sizeof(struct peakfinder_panel_data)); if ( pfdata == NULL ) { return NULL; } - pfdata->panel_h = (int *)malloc(num_panels*sizeof(int)); + pfdata->panel_h = (int *)cfmalloc(num_panels*sizeof(int)); if ( pfdata->panel_h == NULL ) { - free(pfdata); + cffree(pfdata); return NULL; } - pfdata->panel_w = (int *)malloc(num_panels*sizeof(int)); + pfdata->panel_w = (int *)cfmalloc(num_panels*sizeof(int)); if ( pfdata->panel_w == NULL ) { - free(pfdata->panel_h); - free(pfdata); + cffree(pfdata->panel_h); + cffree(pfdata); return NULL; } - pfdata->panel_data = (float **)malloc(num_panels*sizeof(float*)); + pfdata->panel_data = (float **)cfmalloc(num_panels*sizeof(float*)); if ( pfdata->panel_data == NULL ) { - free(pfdata->panel_w); - free(pfdata->panel_h); - free(pfdata); + cffree(pfdata->panel_w); + cffree(pfdata->panel_h); + cffree(pfdata); return NULL; } @@ -468,10 +468,10 @@ static struct peakfinder_panel_data *allocate_panel_data(int num_panels) static void free_panel_data(struct peakfinder_panel_data *pfdata) { - free(pfdata->panel_data); - free(pfdata->panel_w); - free(pfdata->panel_h); - free(pfdata); + cffree(pfdata->panel_data); + cffree(pfdata->panel_w); + cffree(pfdata->panel_h); + cffree(pfdata); } @@ -496,48 +496,48 @@ static struct radial_stats* allocate_radial_stats(int num_rad_bins) { struct radial_stats* rstats; - rstats = (struct radial_stats *)malloc(sizeof(struct radial_stats)); + rstats = (struct radial_stats *)cfmalloc(sizeof(struct radial_stats)); if ( rstats == NULL ) { return NULL; } - rstats->roffset = (float *)malloc(num_rad_bins*sizeof(float)); + rstats->roffset = (float *)cfmalloc(num_rad_bins*sizeof(float)); if ( rstats->roffset == NULL ) { - free(rstats); + cffree(rstats); return NULL; } - rstats->rthreshold = (float *)malloc(num_rad_bins*sizeof(float)); + rstats->rthreshold = (float *)cfmalloc(num_rad_bins*sizeof(float)); if ( rstats->rthreshold == NULL ) { - free(rstats->roffset); - free(rstats); + cffree(rstats->roffset); + cffree(rstats); return NULL; } - rstats->lthreshold = (float *)malloc(num_rad_bins*sizeof(float)); + rstats->lthreshold = (float *)cfmalloc(num_rad_bins*sizeof(float)); if ( rstats->lthreshold == NULL ) { - free(rstats->rthreshold); - free(rstats->roffset); - free(rstats); + cffree(rstats->rthreshold); + cffree(rstats->roffset); + cffree(rstats); return NULL; } - rstats->rsigma = (float *)malloc(num_rad_bins*sizeof(float)); + rstats->rsigma = (float *)cfmalloc(num_rad_bins*sizeof(float)); if ( rstats->rsigma == NULL ) { - free(rstats->roffset); - free(rstats->rthreshold); - free(rstats->lthreshold); - free(rstats); + cffree(rstats->roffset); + cffree(rstats->rthreshold); + cffree(rstats->lthreshold); + cffree(rstats); return NULL; } - rstats->rcount = (int *)malloc(num_rad_bins*sizeof(int)); + rstats->rcount = (int *)cfmalloc(num_rad_bins*sizeof(int)); if ( rstats->rcount == NULL ) { - free(rstats->roffset); - free(rstats->rthreshold); - free(rstats->lthreshold); - free(rstats->rsigma); - free(rstats); + cffree(rstats->roffset); + cffree(rstats->rthreshold); + cffree(rstats->lthreshold); + cffree(rstats->rsigma); + cffree(rstats); return NULL; } @@ -549,12 +549,12 @@ static struct radial_stats* allocate_radial_stats(int num_rad_bins) static void free_radial_stats(struct radial_stats *rstats) { - free(rstats->roffset); - free(rstats->rthreshold); - free(rstats->lthreshold); - free(rstats->rsigma); - free(rstats->rcount); - free(rstats); + cffree(rstats->roffset); + cffree(rstats->rthreshold); + cffree(rstats->lthreshold); + cffree(rstats->rsigma); + cffree(rstats->rcount); + cffree(rstats); } @@ -663,85 +663,85 @@ struct peakfinder_peak_data *allocate_peak_data(int max_num_peaks) { struct peakfinder_peak_data *pkdata; - pkdata = (struct peakfinder_peak_data*)malloc(sizeof(struct peakfinder_peak_data)); + pkdata = (struct peakfinder_peak_data*)cfmalloc(sizeof(struct peakfinder_peak_data)); if ( pkdata == NULL ) { return NULL; } - pkdata->npix = (int *)malloc(max_num_peaks*sizeof(int)); + pkdata->npix = (int *)cfmalloc(max_num_peaks*sizeof(int)); if ( pkdata->npix == NULL ) { - free(pkdata->npix); - free(pkdata); + cffree(pkdata->npix); + cffree(pkdata); return NULL; } - pkdata->com_fs = (float *)malloc(max_num_peaks*sizeof(float)); + pkdata->com_fs = (float *)cfmalloc(max_num_peaks*sizeof(float)); if ( pkdata->com_fs == NULL ) { - free(pkdata->npix); - free(pkdata); + cffree(pkdata->npix); + cffree(pkdata); return NULL; } - pkdata->com_ss = (float *)malloc(max_num_peaks*sizeof(float)); + pkdata->com_ss = (float *)cfmalloc(max_num_peaks*sizeof(float)); if ( pkdata->com_ss == NULL ) { - free(pkdata->npix); - free(pkdata->com_fs); - free(pkdata); + cffree(pkdata->npix); + cffree(pkdata->com_fs); + cffree(pkdata); return NULL; } - pkdata->com_index = (int *)malloc(max_num_peaks*sizeof(int)); + pkdata->com_index = (int *)cfmalloc(max_num_peaks*sizeof(int)); if ( pkdata->com_ss == NULL ) { - free(pkdata->npix); - free(pkdata->com_fs); - free(pkdata->com_ss); - free(pkdata); + cffree(pkdata->npix); + cffree(pkdata->com_fs); + cffree(pkdata->com_ss); + cffree(pkdata); return NULL; } - pkdata->tot_i = (float *)malloc(max_num_peaks*sizeof(float)); + pkdata->tot_i = (float *)cfmalloc(max_num_peaks*sizeof(float)); if ( pkdata->tot_i == NULL ) { - free(pkdata->npix); - free(pkdata->com_fs); - free(pkdata->com_ss); - free(pkdata->com_index); - free(pkdata); + cffree(pkdata->npix); + cffree(pkdata->com_fs); + cffree(pkdata->com_ss); + cffree(pkdata->com_index); + cffree(pkdata); return NULL; } - pkdata->max_i = (float *)malloc(max_num_peaks*sizeof(float)); + pkdata->max_i = (float *)cfmalloc(max_num_peaks*sizeof(float)); if ( pkdata->max_i == NULL ) { - free(pkdata->npix); - free(pkdata->com_fs); - free(pkdata->com_ss); - free(pkdata->com_index); - free(pkdata->tot_i); - free(pkdata); + cffree(pkdata->npix); + cffree(pkdata->com_fs); + cffree(pkdata->com_ss); + cffree(pkdata->com_index); + cffree(pkdata->tot_i); + cffree(pkdata); return NULL; } - pkdata->sigma = (float *)malloc(max_num_peaks*sizeof(float)); + pkdata->sigma = (float *)cfmalloc(max_num_peaks*sizeof(float)); if ( pkdata->sigma == NULL ) { - free(pkdata->npix); - free(pkdata->com_fs); - free(pkdata->com_ss); - free(pkdata->com_index); - free(pkdata->tot_i); - free(pkdata->max_i); - free(pkdata); + cffree(pkdata->npix); + cffree(pkdata->com_fs); + cffree(pkdata->com_ss); + cffree(pkdata->com_index); + cffree(pkdata->tot_i); + cffree(pkdata->max_i); + cffree(pkdata); return NULL; } - pkdata->snr = (float *)malloc(max_num_peaks*sizeof(float)); + pkdata->snr = (float *)cfmalloc(max_num_peaks*sizeof(float)); if ( pkdata->snr == NULL ) { - free(pkdata->npix); - free(pkdata->com_fs); - free(pkdata->com_ss); - free(pkdata->com_index); - free(pkdata->tot_i); - free(pkdata->max_i); - free(pkdata->sigma); - free(pkdata); + cffree(pkdata->npix); + cffree(pkdata->com_fs); + cffree(pkdata->com_ss); + cffree(pkdata->com_index); + cffree(pkdata->tot_i); + cffree(pkdata->max_i); + cffree(pkdata->sigma); + cffree(pkdata); return NULL; } @@ -750,15 +750,15 @@ struct peakfinder_peak_data *allocate_peak_data(int max_num_peaks) static void free_peak_data(struct peakfinder_peak_data *pkdata) { - free(pkdata->npix); - free(pkdata->com_fs); - free(pkdata->com_ss); - free(pkdata->com_index); - free(pkdata->tot_i); - free(pkdata->max_i); - free(pkdata->sigma); - free(pkdata->snr); - free(pkdata); + cffree(pkdata->npix); + cffree(pkdata->com_fs); + cffree(pkdata->com_ss); + cffree(pkdata->com_index); + cffree(pkdata->tot_i); + cffree(pkdata->max_i); + cffree(pkdata->sigma); + cffree(pkdata->snr); + cffree(pkdata); } @@ -768,38 +768,38 @@ static struct peakfinder_intern_data *allocate_peakfinder_intern_data(int data_s struct peakfinder_intern_data *intern_data; - intern_data = (struct peakfinder_intern_data *)malloc(sizeof(struct peakfinder_intern_data)); + intern_data = (struct peakfinder_intern_data *)cfmalloc(sizeof(struct peakfinder_intern_data)); if ( intern_data == NULL ) { return NULL; } - intern_data->pix_in_peak_map =(char *)calloc(data_size, sizeof(char)); + intern_data->pix_in_peak_map =(char *)cfcalloc(data_size, sizeof(char)); if ( intern_data->pix_in_peak_map == NULL ) { - free(intern_data); + cffree(intern_data); return NULL; } - intern_data->infs =(int *)calloc(data_size, sizeof(int)); + intern_data->infs =(int *)cfcalloc(data_size, sizeof(int)); if ( intern_data->infs == NULL ) { - free(intern_data->pix_in_peak_map); - free(intern_data); + cffree(intern_data->pix_in_peak_map); + cffree(intern_data); return NULL; } - intern_data->inss =(int *)calloc(data_size, sizeof(int)); + intern_data->inss =(int *)cfcalloc(data_size, sizeof(int)); if ( intern_data->inss == NULL ) { - free(intern_data->pix_in_peak_map); - free(intern_data->infs); - free(intern_data); + cffree(intern_data->pix_in_peak_map); + cffree(intern_data->infs); + cffree(intern_data); return NULL; } - intern_data->peak_pixels =(int *)calloc(max_pix_count, sizeof(int)); + intern_data->peak_pixels =(int *)cfcalloc(max_pix_count, sizeof(int)); if ( intern_data->peak_pixels == NULL ) { - free(intern_data->pix_in_peak_map); - free(intern_data->infs); - free(intern_data->inss); - free(intern_data); + cffree(intern_data->pix_in_peak_map); + cffree(intern_data->infs); + cffree(intern_data->inss); + cffree(intern_data); return NULL; } @@ -809,11 +809,11 @@ static struct peakfinder_intern_data *allocate_peakfinder_intern_data(int data_s static void free_peakfinder_intern_data(struct peakfinder_intern_data *pfid) { - free(pfid->peak_pixels); - free(pfid->pix_in_peak_map); - free(pfid->infs); - free(pfid->inss); - free(pfid); + cffree(pfid->peak_pixels); + cffree(pfid->pix_in_peak_map); + cffree(pfid->infs); + cffree(pfid->inss); + cffree(pfid); } @@ -1248,14 +1248,15 @@ static int peakfinder8_base(float *roffset, float *rthreshold, * \param max_res The maximum number of pixels out from the center * \param use_saturated Whether saturated peaks should be considered * - * Runs the peakfinder8 peak search algorithm + * Runs the peakfinder8 peak search algorithm, and returns an \ref ImageFeatureList, + * or NULL on error. */ -int peakfinder8(struct image *img, int max_n_peaks, - float threshold, float min_snr, - int min_pix_count, int max_pix_count, - int local_bg_radius, int min_res, - int max_res, int use_saturated, - int fast_mode, struct pf8_private_data *private_data) +ImageFeatureList *peakfinder8(const struct image *img, int max_n_peaks, + float threshold, float min_snr, + int min_pix_count, int max_pix_count, + int local_bg_radius, int min_res, + int max_res, int use_saturated, + int fast_mode, struct pf8_private_data *private_data) { struct pf8_private_data *geomdata; struct radius_maps *rmaps; @@ -1272,10 +1273,11 @@ int peakfinder8(struct image *img, int max_n_peaks, int remaining_max_num_peaks; int iterations; float max_r; + ImageFeatureList *peaks; iterations = 5; - if ( img->detgeom == NULL) return 1; + if ( img->detgeom == NULL) return NULL; profile_start("pf8-rmaps"); if ( private_data == NULL ) { @@ -1286,21 +1288,21 @@ int peakfinder8(struct image *img, int max_n_peaks, rmaps = geomdata->rmaps; rspixels = geomdata->rpixels; profile_end("pf8-rmaps"); - if (geomdata == NULL) return 1; + if (geomdata == NULL) return NULL; profile_start("pf8-mask"); pfmask = create_peakfinder_mask(img, rmaps, min_res, max_res); profile_end("pf8-mask"); if ( pfmask == NULL ) { if ( private_data == NULL ) free_pf8_private_data(geomdata); - return 1; + return NULL; } pfdata = allocate_panel_data(img->detgeom->n_panels); if ( pfdata == NULL) { if ( private_data == NULL ) free_pf8_private_data(geomdata); free_peakfinder_mask(pfmask); - return 1; + return NULL; } for ( pi=0 ; pi<img->detgeom->n_panels ; pi++ ) { @@ -1327,7 +1329,7 @@ int peakfinder8(struct image *img, int max_n_peaks, if ( private_data == NULL ) free_pf8_private_data(geomdata); free_peakfinder_mask(pfmask); free_panel_data(pfdata); - return 1; + return NULL; } for ( i=0 ; i<rstats->n_rad_bins ; i++) { @@ -1389,10 +1391,11 @@ int peakfinder8(struct image *img, int max_n_peaks, free_peakfinder_mask(pfmask); free_panel_data(pfdata); free_radial_stats(rstats); - return 1; + return NULL; } remaining_max_num_peaks = max_n_peaks; + peaks = image_feature_list_new(); profile_start("pf8-search"); for ( pi=0 ; pi<img->detgeom->n_panels ; pi++) { @@ -1430,8 +1433,9 @@ int peakfinder8(struct image *img, int max_n_peaks, free_peakfinder_mask(pfmask); free_panel_data(pfdata); free_radial_stats(rstats); + image_feature_list_free(peaks); profile_end("pf8-search"); - return 1; + return NULL; } peaks_to_add = num_found_peaks; @@ -1454,11 +1458,10 @@ int peakfinder8(struct image *img, int max_n_peaks, } } - image_add_feature(img->features, + image_add_feature(peaks, pkdata->com_fs[pki]+0.5, pkdata->com_ss[pki]+0.5, - pi, img, pkdata->tot_i[pki], - NULL); + pi, pkdata->tot_i[pki], NULL); } } profile_end("pf8-search"); @@ -1468,5 +1471,5 @@ int peakfinder8(struct image *img, int max_n_peaks, free_panel_data(pfdata); free_radial_stats(rstats); free_peak_data(pkdata); - return 0; + return peaks; } |