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2024-02-19Draw attention to the need for separate Mille dirs for cluster jobsThomas White
2024-01-05get_hkl: Read MTZ filesThomas White
There are still some rough edges, e.g. it only works with a simple I/SIGI column (not I+/I-), and can't yet interpret the symmetry information in the file. However, it's still better than the old mtz2hkl script. Closes: https://gitlab.desy.de/thomas.white/crystfel/-/issues/7
2023-08-31scripts/detector-shift: Add placeholder messageThomas White
We don't do per-crystal beam center refinement any more, so it won't work.
2023-02-15scripts/install-indexers: Mention that you have to modify the scriptThomas White
2022-12-02scripts/install-indexers: Handle various platformsThomas White
Previously, it assumed Linux and x86_64 Fixes: https://gitlab.desy.de/thomas.white/crystfel/-/issues/74
2022-08-24scripts/peakogram-stream: Better handling of multiple streamsThomas White
This allows the "-i" option to be given multiple times, instead of having to concatenate the streams via stdin.
2022-08-24detector-shift: Better handling of multiple input streamsThomas White
Previously, the only way to process more than one stream was to concatenate them via stdin. Now, you can give '--' followed by a list of streams. The '--' is needed to distinguish from the situation where a geometry file is to be updated.
2022-03-01Add scripts/install-indexersThomas White
2021-05-17Resolve FIXMEs and TODOsThomas White
Prompted by the article linked below, for each FIXME/TODO I've either referenced an issue in the tracker, or removed it if it's not worth fixing. https://schleiss.io/plotting-source-code-todos-for-open-source-projects
2021-04-23Improve documentation about reflection data exportThomas White
2021-04-08Fix bugs in gen-sfs-anoThomas White
2021-04-01Fix authorship for stream2sol.pyThomas White
2021-04-01FromFile indexer, stream2sol.py: Remove space escapingThomas White
This isn't necessary after all, for the same reason that im-sandbox doesn't need escaping: it can count off the fields where spaces aren't allowed, and anything left is the filename. I was over-thinking things.
2021-03-31FromFile indexer, stream2sol.py: Handle spaces in filenameThomas White
2021-03-31FromFile indexer, stream2sol.py: Add/update copyright commentsThomas White
2021-03-31stream2sol.py: Remove --include-parsThomas White
These are now obsolete, and the distributed version of CrystFEL will choke on them.
2021-03-31stream2sol.py: Remove unused definitionsThomas White
2021-03-31stream2sol.py: Add lattice type, centering and unique axisThomas White
2021-03-31stream2sol.py: Strip trailing whitespaceThomas White
2021-03-31stream2sol.py: Initial importThomas White
2020-11-12Add scripts/make-csplitThomas White
2020-09-22Remove old scriptsThomas White
2020-09-10scripts/display-hdf5: Open file in read-only modeThomas White
2020-08-05Add scripts/display-hdf5Thomas White
2020-05-12scripts/*2hkl: Add reflection list headerThomas White
2020-03-05transfer-geom: Only write coffset for panels which have themThomas White
2020-03-05plot-pr-contourmap: Don't use "print"Thomas White
Makes it compatible with Python 3
2020-02-04extract-geom: Remove extra newlinesThomas White
2020-01-10Remove scripts/cell-pleaseThomas White
Replaced by cell_explorer many years ago
2020-01-10Mass update of copyright datesThomas White
2019-11-13extract-geom: Fix newlineThomas White
2019-09-09turbo-index-slurm: Remove --workdir optionThomas White
In the latest version, it's been renamed to --chdir. But it's not necessary anyway. The default working directory is the sbatch caller's directory.
2019-07-17scripts/plot-pr: Allow the use of folder names other than "pr-logs"Thomas White
2019-06-21scripts/plot-pr-contourmap: Allow the use of folder names other than "pr-logs"Thomas White
2019-06-19Rename scripts/plot-contourmap -> scripts/plot-pr-contourmapThomas White
2019-04-12move-entire-detector: Add z directionThomas White
2019-03-15extract-geom: Don't add extra newlinesThomas White
2019-03-06turbo-index-slurm: Comment out --nice valueThomas White
It's not needed as long as the queue implements proper fair sharing between users.
2019-03-05check-{near-bragg,peak-detection}: Give better errorsThomas White
2019-02-08scripts/plot-contourmap: Specify colours of contour linesThomas White
2018-12-11scripts/detector-shift: Click to choose different centerChun Hong Yoon
2018-11-13Add some new scriptsThomas White
2018-09-16scripts/sum-peaks: Accept - for stdinThomas White
2018-09-14Update turbo-index-lsf to match turbo-index-slurm as much as possibleThomas White
2018-09-02ave-resolution: Accept - for stdinThomas White
2018-06-29Add scripts/extract-geomThomas White
2018-06-28Fix check-near-braggThomas White
2018-06-22check-near-bragg/check-peak-detection: Give better error messageThomas White
2018-06-10indexamajig: Estimate resolution based on peaks onlyThomas White
2018-05-31check_{peak_detection,near_bragg}: Warn if stream is older than imageThomas White
generated by cgit v1.2.3 (git 2.25.1) at 2024-05-10 02:13:38 +0000