blob: 4077c6e2858fd3c6a08533911375187200ea5d66 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
|
#!/usr/bin/perl -w
use strict;
use File::Basename;
my $args = join(" ", splice(@ARGV, 1, scalar(@ARGV)-1));
if ( !($args eq "") ) {
printf("Extra arguments for hdfsee: %s\n", $args);
} else {
# Default arguments - feel free to override!
$args = "--binning=2 --int-boost=10";
printf("Using default arguments for hdfsee: %s\n", $args);
}
open(FH, $ARGV[0]);
open(TMP, "> list.tmp");
my $in_image = 0;
my $line;
my $filename;
my $event = "";
while ( $line = <FH> ) {
chomp $line;
my $handled = 0;
if ( $in_image ) {
printf(TMP "%s\n", $line);
$handled = 1;
}
if ( $line =~ /^Reflections\ measured\ after\ indexing$/ ) {
$in_image = 1;
$handled = 1;
}
if ( $line =~ /^Image\ filename:\ (.+)$/ ) {
$filename = $1;
$handled = 1;
}
if ( $line =~ /^Event:\ (.+)$/ ) {
$event = $1;
}
if ( $line =~ /^End\ of\ reflections$/ ) {
close(TMP);
# Example of how to do "basename" and "prefix":
# $filename = "images-old/".basename($filename);
my $ev;
my $evr;
if ( $event eq "" ) {
$ev = "";
$evr = "";
} else {
$ev = " --event=".$event;
$evr = ", event ".$event;
}
printf(STDERR "Viewing %s%s\n", $filename, $evr);
system("hdfsee ".$filename.$ev.
" --peak-overlay=list.tmp ".$args);
if ( $? != 0 ) { exit; }
unlink("list.tmp");
open(TMP, "> list.tmp");
$handled = 1;
$in_image = 0;
$event = "";
}
}
|
