diff options
| author | Thomas White <taw@physics.org> | 2013-12-03 17:24:34 +0100 |
|---|---|---|
| committer | Thomas White <taw@physics.org> | 2013-12-03 17:24:34 +0100 |
| commit | ca5db9466bf7da04f61f9bc86463bfdcdc025ecf (patch) | |
| tree | 88a9c5867fe4addd9e827af82db98c16adf114f3 | |
| parent | e93f8d734b509cc75028d6ad41d2ca842cbdf57f (diff) | |
Update docs
| -rw-r--r-- | doc/reference/libcrystfel/CrystFEL-docs.sgml | 1 | ||||
| -rw-r--r-- | doc/reference/libcrystfel/CrystFEL-sections.txt | 13 | ||||
| -rw-r--r-- | libcrystfel/src/index.h | 7 |
3 files changed, 19 insertions, 2 deletions
diff --git a/doc/reference/libcrystfel/CrystFEL-docs.sgml b/doc/reference/libcrystfel/CrystFEL-docs.sgml index 2381bbc5..b840f04b 100644 --- a/doc/reference/libcrystfel/CrystFEL-docs.sgml +++ b/doc/reference/libcrystfel/CrystFEL-docs.sgml @@ -115,6 +115,7 @@ <chapter> <title>Miscellaneous</title> <xi:include href="xml/quaternion.xml"/> + <xi:include href="xml/histogram.xml"/> <xi:include href="xml/utils.xml"/> </chapter> diff --git a/doc/reference/libcrystfel/CrystFEL-sections.txt b/doc/reference/libcrystfel/CrystFEL-sections.txt index 51e2930c..7422f5ca 100644 --- a/doc/reference/libcrystfel/CrystFEL-sections.txt +++ b/doc/reference/libcrystfel/CrystFEL-sections.txt @@ -167,6 +167,7 @@ ph_eV_to_lambda ph_lambda_to_eV random_flat flat_noise +show_matrix </SECTION> <SECTION> @@ -181,6 +182,15 @@ quat_rot </SECTION> <SECTION> +<FILE>histogram</FILE> +Histogram +histogram_init +histogram_free +histogram_add_value +histogram_show +</SECTION> + +<SECTION> <FILE>image</FILE> image ImageFeatureList @@ -356,6 +366,7 @@ add_copy_hdf5_field new_copy_hdf5_field_list free_copy_hdf5_field_list get_peaks +hdfile_is_scalar </SECTION> <SECTION> @@ -391,6 +402,7 @@ PartialityModel find_intersections select_intersections update_partialities +update_partialities_2 polarisation_correction </SECTION> @@ -421,6 +433,7 @@ INTEGRATION_DEFAULTS_PROF2D INTEGRATION_DEFAULTS_RINGS INTEGRATION_METHOD_MASK IntegrationMethod +IntDiag integrate_all integration_method </SECTION> diff --git a/libcrystfel/src/index.h b/libcrystfel/src/index.h index e71a4c6f..e36e531c 100644 --- a/libcrystfel/src/index.h +++ b/libcrystfel/src/index.h @@ -67,7 +67,8 @@ * @INDEXING_MOSFLM: Invoke MOSFLM * @INDEXING_REAX: DPS algorithm using known cell parameters * @INDEXING_GRAINSPOTTER: Invoke GrainSpotter - * @INDEXING_XDS: Invokve XDS + * @INDEXING_XDS: Invoke XDS + * @INDEXING_SIMULATION: Dummy value * @INDEXING_CHECK_CELL_COMBINATIONS: Check linear combinations of unit cell * axes for agreement with given cell. * @INDEXING_CHECK_CELL_AXES: Check unit cell axes for agreement with given @@ -79,7 +80,9 @@ * @INDEXING_USE_CELL_PARAMETERS: Use the unit cell parameters to guide the * indexingprocess. * - * An enumeration of all the available indexing methods. + * An enumeration of all the available indexing methods. The dummy value + * @INDEXING_SIMULATION is used by partial_sim to indicate that no indexing was + * performed, and that the indexing results are just from simulation. **/ typedef enum { |