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-rw-r--r--libcrystfel/src/peakfinder8.c3
-rw-r--r--src/rejection.c2
-rw-r--r--tests/prediction_gradient_check.c2
-rw-r--r--tests/ring_check.c4
4 files changed, 0 insertions, 11 deletions
diff --git a/libcrystfel/src/peakfinder8.c b/libcrystfel/src/peakfinder8.c
index 93a8cc06..537c2365 100644
--- a/libcrystfel/src/peakfinder8.c
+++ b/libcrystfel/src/peakfinder8.c
@@ -662,7 +662,6 @@ static void search_in_ring(int ring_width, int com_fs_int, int com_ss_int,
float curr_i;
int np_sigma;
- int np_counted;
int local_radius;
float sum_i;
@@ -673,7 +672,6 @@ static void search_in_ring(int ring_width, int com_fs_int, int com_ss_int,
sum_i = 0;
sum_i_squared = 0;
np_sigma = 0;
- np_counted = 0;
local_radius = 0;
for ( ssj = -ring_width ; ssj<ring_width ; ssj++ ) {
@@ -712,7 +710,6 @@ static void search_in_ring(int ring_width, int com_fs_int, int com_ss_int,
*background_max_i = curr_i;
}
}
- np_counted += 1;
}
}
diff --git a/src/rejection.c b/src/rejection.c
index 346d2c30..4e3ff6ba 100644
--- a/src/rejection.c
+++ b/src/rejection.c
@@ -168,7 +168,6 @@ static double calculate_cchalf(RefList *template, RefList *full,
double sig2E, sig2Y;
int n = 0;
double wSum = 0.0;
- double wSum2 = 0.0;
double mean = 0.0;
double S = 0.0;
double all_sum_var = 0.0;
@@ -258,7 +257,6 @@ static double calculate_cchalf(RefList *template, RefList *full,
/* Running variance calculation to get sig2Y */
wSum += w;
- wSum2 += w*w;
meanOld = mean;
mean = meanOld + (w/wSum) * (refl_mean - meanOld);
S += w * (refl_mean - meanOld) * (refl_mean - mean);
diff --git a/tests/prediction_gradient_check.c b/tests/prediction_gradient_check.c
index 6d8e596a..493da445 100644
--- a/tests/prediction_gradient_check.c
+++ b/tests/prediction_gradient_check.c
@@ -218,7 +218,6 @@ static double test_gradients(Crystal *cr, double incr_val, int refine,
RefList *reflections;
FILE *fh = NULL;
int ntot = 0;
- double total = 0.0;
char tmp[32];
double *vec1;
double *vec2;
@@ -328,7 +327,6 @@ static double test_gradients(Crystal *cr, double incr_val, int refine,
continue;
}
- total += fabsl(cgrad - grad);
ntot++;
if ( !within_tolerance(grad, cgrad, 5.0)
diff --git a/tests/ring_check.c b/tests/ring_check.c
index 863802c7..329456fa 100644
--- a/tests/ring_check.c
+++ b/tests/ring_check.c
@@ -47,8 +47,6 @@ static void third_integration_check(struct image *image, int n_trials,
int *fail, gsl_rng *rng)
{
double mean_intensity = 0.0;
- double mean_bg = 0.0;
- double mean_max = 0.0;
double mean_sigma = 0.0;
int i;
int fs, ss;
@@ -80,8 +78,6 @@ static void third_integration_check(struct image *image, int n_trials,
}
mean_intensity /= n_trials;
- mean_bg /= n_trials;
- mean_max /= n_trials;
mean_sigma /= n_trials;
STATUS(" Third check (mean values): intensity = %.2f, sigma = %.2f,"