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The main motivation for this was that argparse handles positional
arguments which start with minus signs, which is the behaviour we prefer
here.
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Not sure what this is doing here, or why it wasn't noticed before...
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This allows indexing to be attempted again (either a new method or with
"retry") if the prediction refinement fails, increasing overall indexing
rate.
Side-effect: there are some hoops which would need to be jumped through
to store the profile radius before refinement and hence enable
scripts/plot-predict-refine to work. For now, we'll ignore this as it's
clear that the prediction refinement is working.
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...because it very often seems to cause problems.
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Because of a bug in the regexp, it did not apply the shifts to all
panels.
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Plot histogram of CC.
Conflicts:
scripts/plot-cc-and-scale.R
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frame-wise statistics from process_hkl.
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