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2018-06-20Finish removing "selector"Thomas White
2018-06-18indexamajig: Tidy up --helpThomas White
2018-06-18Get rid of "selector"Thomas White
2018-06-18Remove tmp_enumThomas White
2018-06-18Add interface to XGANDALF indexerYaroslav Gevorkov
2018-06-12list_events: Abort creation if event list can't be made for any fileThomas White
Previously, it would exit if a file couldn't be opened, but not if its layout was wrong for the geometry file. Now, it always exits to allow the problem to be fixed.
2018-06-12hdfsee: Show image size at binning 1Thomas White
Used to be "raw image size", but that's meaningless since "de-slabbification". All the panels are stored separately. This commit also clarifies the meaning of "Smaller numbers".
2018-06-12Whitespace fussinessThomas White
2018-06-10hdfsee: Fix statusbar snprintf() nonsenseThomas White
2018-06-10indexamajig: Estimate resolution based on peaks onlyThomas White
2018-05-30Merge branch 'tom/peakfinder9'Thomas White
2018-05-30Whitespace fussinessThomas White
2018-05-30Use only one min-snr optionThomas White
2018-05-30Changed parameter window-radius -> local-bg-radiusYaroslav Gevorkov
2018-05-30Changed sig_fac to min_snrYaroslav Gevorkov
2018-05-30libcrystfel should link against GSL and pthreadsThomas White
Then programs using libcrystfel don't need -lgsl (unless they use it themselves, of course)
2018-05-25Delete obsolete include and variableYaroslav Gevorkov
2018-05-25Change getopt numbers to avoid overlap with charsYaroslav Gevorkov
2018-05-24Formatting in --helpThomas White
2018-05-24Fix typos in helpThomas White
2018-05-24Generalise peakfinder9 error messages, and fail if not compiled inThomas White
2018-05-24Update authorship and copyright datesThomas White
2018-05-24FormattingThomas White
2018-05-24Add "peakfinder9"Yaroslav Gevorkov
2018-05-24indexamajig: Warn if a frame takes more than 10 minutes to processThomas White
2018-05-24indexamajig: Show timeout in minutes not secondsThomas White
2018-05-17Merge branch 'tom/cmake'Thomas White
2018-05-11partialator: Don't refuse to start if pr-logs folder existsThomas White
It's a nice idea, but I'm not sure it helps.
2018-05-11Fix up scaling definitionsThomas White
2018-05-11Disable initial scaling if requestedThomas White
2018-05-11Fix memory leaksThomas White
2018-05-07Remove unnecessary scaling loopThomas White
2018-05-07Add more reflection checks before scalingThomas White
2018-05-07Add SCALE_VERBOSE_ERRORSThomas White
2018-05-07Implement scale_one_crystal(.., SCALE_NO_B)Thomas White
2018-05-07Pass scaling flags downThomas White
2018-05-07Simplify scalingThomas White
2018-05-07Move residual() and log_residual() to merge.cThomas White
2018-05-07Preparation for adjusting B factor during post-refinementThomas White
Add --no-Bscale option to partialator, and pass down as far as needed residual() no longer does scaling: call scale_one_crystal() first if necessary scale_one() replaces old linear_scale() function to scale a pair of RefLists (but so far does the same as the old function)
2018-05-07Remove unused parameterThomas White
2018-05-04Expand warning about --push-res without rescutThomas White
2018-05-04Put list of indexing methods into stream headerThomas White
Needed for when the methods are auto-determined.
2018-05-04geoptimiser: Add options for AGIPDOleksandr Yefanov
2018-05-04Formatting fussinessThomas White
2018-05-04geoptimiser: Add --no-rotation and --stretch-mapOleksandr Yefanov
2018-05-04geoptimiser: Add --max-num-peaks-per-pixelOleksandr Yefanov
2018-05-02Revert 1/corr weighting during mergeThomas White
This restores the scaling behaviour (and performance) of version 0.6.3
2018-05-02Remove scale_all_to_referenceThomas White
2018-05-02Comment out message about disabled functionThomas White
2018-04-30geoptimiser: Fix rotationOleksandr Yefanov
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